RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 GALNT5Q7Z7M9 940 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 TCEAL8Q8IYN2 117 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 JMYQ8N9B5 988 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 SPIRE2Q8WWL2 714 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 FAM81BQ96LP2 452 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 HAUS7Q99871 368 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 PNMA8BQ9ULN7 279 aaPredicted RBP9.89□□□□□ -0.83
CDKL5-206ENST00000623610 LRRC7Q96NW7 1537 aa9.89□□□□□ -0.83
CDKL5-206ENST00000623610 SETBP1Q9Y6X0 1596 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 CHD2O14647 1828 aaKnown RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 ALG1L2C9J202 215 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 SSBP05455 408 aaKnown RBP eCLIP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 PURAQ00577 322 aaKnown RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 PIN1Q13526 163 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 WTAPQ15007 396 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 C11orf91Q3C1V1 193 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 STON2Q8WXE9 905 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 PRIMPOLQ96LW4 560 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 ZCCHC17Q9NP64 241 aaKnown RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 PIH1D1Q9NWS0 290 aaKnown RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 PCSK1NQ9UHG2 260 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 CD2APQ9Y5K6 639 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 ADGRF5Q8IZF2 1346 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 IFT172Q9UG01 1749 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 CCDC196A0A1B0GTZ2 297 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 BTF3P20290 206 aaKnown RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 DDIT3P35638 169 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 OCLNQ16625 522 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 FAM102BQ5T8I3 360 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 RSBN1LQ6PCB5 846 aaPredicted RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 CAPN12Q6ZSI9 719 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 THNSL2Q86YJ6 484 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 ERC1Q8IUD2 1116 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 ANKMY2Q8IV38 441 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 MAGEB6Q8N7X4 407 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 PJA1Q8NG27 643 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 TRPM4Q8TD43 1214 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 KIF2CQ99661 725 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 NCAPGQ9BPX3 1015 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 EFCC1Q9HA90 598 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 ALG13Q9NP73 1137 aaKnown RBP9.88□□□□□ -0.83
CDKL5-206ENST00000623610 BLOC1S4Q9NUP1 217 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 CEP72Q9P209 647 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 AFG3L2Q9Y4W6 797 aa9.88□□□□□ -0.83
CDKL5-206ENST00000623610 LINC00854A0A1B0GVQ3 168 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 TMCC2O75069 709 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 HOXA10P31260 410 aaPredicted RBP9.87□□□□□ -0.83
CDKL5-206ENST00000623610 GUCY2FP51841 1108 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 NBPF8Q3BBV2 869 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 BTN2A1Q7KYR7 527 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 OTOP3Q7RTS5 596 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 GPRASP2Q96D09 838 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 DDX49Q9Y6V7 483 aaKnown RBP9.87□□□□□ -0.83
CDKL5-206ENST00000623610 IQSEC2Q5JU85 1478 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 DIP2AQ14689 1571 aa9.87□□□□□ -0.83
CDKL5-206ENST00000623610 XIRP1Q702N8 1843 aaKnown RBP9.87□□□□□ -0.83
CDKL5-206ENST00000623610 METP08581 1390 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 GPRASP1Q5JY77 1395 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 APAF1O14727 1248 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 PAK3O75914 559 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 LETM1O95202 739 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 TYRP1P17643 537 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 VCAM1P19320 739 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 CAPN3P20807 821 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 FXR2P51116 673 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 GTF2A2P52657 109 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 KIF22Q14807 665 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 SWI5Q1ZZU3 235 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 MUM1Q2TAK8 710 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 RABL6Q3YEC7 729 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 CFAP58Q5T655 872 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 LRCH2Q5VUJ6 765 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 TTLL5Q6EMB2 1281 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 TRIM11Q96F44 468 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 FANCFQ9NPI8 374 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 SNCAIPQ9Y6H5 919 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 PTPRUQ92729 1446 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 NWD1Q149M9 1564 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 J3KRW8 73 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 K7ENM7 598 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 SPTLC1O15269 473 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 GFPT2O94808 682 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 HSPA5P11021 654 aaKnown RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 MZF1P28698 734 aaPredicted RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 PMLP29590 882 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 GALNSP34059 522 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 CTNNA1P35221 906 aaKnown RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 KRT20P35900 424 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 RAD52P43351 418 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 NSUN2Q08J23 767 aaKnown RBP eCLIP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 DPYDQ12882 1025 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 SEPT7Q16181 437 aaKnown RBP9.86□□□□□ -0.83
CDKL5-206ENST00000623610 MAP7D1Q3KQU3 841 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 TUBB8Q3ZCM7 444 aa9.86□□□□□ -0.83
CDKL5-206ENST00000623610 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms