RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 VPS54Q9P1Q0 977 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 ADAMTS7Q9UKP4 1686 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 SCAND2PQ9GZW5 306 aaPredicted RBP14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 PDS5AQ29RF7 1337 aaKnown RBP14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 IGSF3O75054 1194 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 PPP2R5BQ15173 497 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 VPS33BQ9H267 617 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 F13A1P00488 732 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 DNM1Q05193 864 aaKnown RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 GADL1Q6ZQY3 521 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 ENAHQ8N8S7 591 aaPredicted RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 FAM151AQ8WW52 585 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 BRWD3Q6RI45 1802 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 YDJCA8MPS7 323 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 ASNSP08243 561 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 TOB2Q14106 344 aaPredicted RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 L1TD1Q5T7N2 865 aaKnown RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 FCHSD1Q86WN1 690 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 ZSCAN16Q9H4T2 348 aaPredicted RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 ENTPD3O75355 529 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 CLSTN1O94985 981 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 CALML3P27482 149 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 LIFRP42702 1097 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 TMEM179Q6ZVK1 233 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 TRMT1LQ7Z2T5 733 aaKnown RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 VIL1P09327 827 aaKnown RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 SBK1Q52WX2 424 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 KIF2CQ99661 725 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 CPVLQ9H3G5 476 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 CEP131Q9UPN4 1083 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
SCAMP1-207ENST00000621999 WNT10BO00744 389 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 TRAF1Q13077 416 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 TMEM47Q9BQJ4 181 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 ZNF341Q9BYN7 854 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 PANK2Q9BZ23 570 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 TJP1Q07157 1748 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 NFKBIEO00221 500 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 FLOT1O75955 427 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 GNA11P29992 359 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 IREB2P48200 963 aaKnown RBP14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 ARMC9Q7Z3E5 817 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 DGKHQ86XP1 1220 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 SSBP05455 408 aaKnown RBP eCLIP14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 IRX3P78415 501 aaPredicted RBP14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 CHURC1Q8WUH1 139 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 CNPY2Q9Y2B0 182 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 ZHX2Q9Y6X8 837 aa14.37□□□□□ -0.11
SCAMP1-207ENST00000621999 DDAH1O94760 285 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 MBD3O95983 291 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 KRT40Q6A162 431 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 CCDC84Q86UT8 332 aaPredicted RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 DIS3L2Q8IYB7 885 aaKnown RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 GPKOWQ92917 476 aaPredicted RBP eCLIP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 HOOK1Q9UJC3 728 aaKnown RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 SPDYE3A6NKU9 549 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 KRT2P35908 639 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 HERC5Q9UII4 1024 aaKnown RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 EEF2P13639 858 aaKnown RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 JAKMIP3Q5VZ66 844 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 GPC2Q8N158 579 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 FAM13BQ9NYF5 915 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 TSGA10IPQ3SY00 556 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 DDX4Q9NQI0 724 aaKnown RBP14.36□□□□□ -0.11
SCAMP1-207ENST00000621999 ORC4O43929 436 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 MARCKSP29966 332 aaPredicted RBP14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 SPP2Q13103 211 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 SMCR8Q8TEV9 937 aaPredicted RBP14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 PAGR1Q9BTK6 254 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 UBR2Q8IWV8 1755 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 SMIM22K7EJ46 135 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 DHX8Q14562 1220 aaKnown RBP14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 NSMFQ6X4W1 530 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 NEDD1Q8NHV4 660 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 SLC10A4Q96EP9 437 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 EPHX2P34913 555 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 MRPL12P52815 198 aaKnown RBP14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 CDC37L1Q7L3B6 337 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 ZFPM1Q8IX07 1006 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 TTC14Q96N46 770 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 LY9Q9HBG7 655 aa14.35□□□□□ -0.11
SCAMP1-207ENST00000621999 CFBP00751 764 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 RASA1P20936 1047 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 PKP1Q13835 747 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 SASS6Q6UVJ0 657 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 FAM163AQ96GL9 167 aaPredicted RBP14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 ADARB2Q9NS39 739 aaKnown RBP14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 ZBED4O75132 1171 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 BMP3P12645 472 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 DPF2Q92785 391 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 SHTN1A0MZ66 631 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 USP17L5A8MUK1 530 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 PIK3AP1Q6ZUJ8 805 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms