RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 NTRK3Q16288 839 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 AGBL3Q8NEM8 1001 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
FAM3A-222ENST00000621967 ALG1Q9BT22 464 aa20.12■□□□□ 0.81
FAM3A-222ENST00000621967 CYP7A1P22680 504 aa20.11■□□□□ 0.81
FAM3A-222ENST00000621967 CDC27P30260 824 aa20.11■□□□□ 0.81
FAM3A-222ENST00000621967 SLF2Q8IX21 1173 aa20.11■□□□□ 0.81
FAM3A-222ENST00000621967 AIDAQ96BJ3 306 aa20.11■□□□□ 0.81
FAM3A-222ENST00000621967 LY9Q9HBG7 655 aa20.11■□□□□ 0.81
FAM3A-222ENST00000621967 EPB41L4AQ9HCS5 686 aaPredicted RBP20.11■□□□□ 0.81
FAM3A-222ENST00000621967 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
FAM3A-222ENST00000621967 PATL2C9JE40 543 aaKnown RBP20.1■□□□□ 0.81
FAM3A-222ENST00000621967 CTIFO43310 598 aaKnown RBP20.1■□□□□ 0.81
FAM3A-222ENST00000621967 ZNF202O95125 648 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 DIXDC1Q155Q3 683 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 KRT40Q6A162 431 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 TMED8Q6PL24 325 aaPredicted RBP20.1■□□□□ 0.81
FAM3A-222ENST00000621967 CPLX2Q6PUV4 134 aaKnown RBP20.1■□□□□ 0.81
FAM3A-222ENST00000621967 TSC1Q92574 1164 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 AIFM3Q96NN9 605 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 SENP2Q9HC62 589 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 MROH7-TTC4A0A0A0MT08 1334 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 STK36Q9NRP7 1315 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.1■□□□□ 0.81
FAM3A-222ENST00000621967 ZBTB43O43298 467 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 PFKFB1P16118 471 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 RPS12P25398 132 aaKnown RBP20.1■□□□□ 0.81
FAM3A-222ENST00000621967 LIFRP42702 1097 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 DPCR1Q3MIW9 517 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 GPC2Q8N158 579 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 OGFOD1Q8N543 542 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 TIGD1Q96MW7 591 aa20.1■□□□□ 0.81
FAM3A-222ENST00000621967 FAM237AA0A1B0GTK4 181 aa20.09■□□□□ 0.81
FAM3A-222ENST00000621967 PPP6R2O75170 966 aa20.09■□□□□ 0.81
FAM3A-222ENST00000621967 WDHD1O75717 1129 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-222ENST00000621967 SCNN1DP51172 638 aa20.09■□□□□ 0.81
FAM3A-222ENST00000621967 IFNL3Q8IZI9 196 aa20.09■□□□□ 0.81
FAM3A-222ENST00000621967 ZNF384Q8TF68 577 aa20.09■□□□□ 0.81
FAM3A-222ENST00000621967 FAM217BQ9NTX9 383 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-222ENST00000621967 HDAC9Q9UKV0 1011 aa20.09■□□□□ 0.81
FAM3A-222ENST00000621967 LDHCP07864 332 aa20.08■□□□□ 0.81
FAM3A-222ENST00000621967 SLC3A2P08195 630 aaKnown RBP20.08■□□□□ 0.81
FAM3A-222ENST00000621967 U2AF2P26368 475 aaKnown RBP eCLIP20.08■□□□□ 0.81
FAM3A-222ENST00000621967 NLRP12P59046 1061 aa20.08■□□□□ 0.81
FAM3A-222ENST00000621967 PTPAQ15257 358 aa20.08■□□□□ 0.81
FAM3A-222ENST00000621967 GMLQ99445 158 aa20.08■□□□□ 0.81
FAM3A-222ENST00000621967 HPSEQ9Y251 543 aa20.08■□□□□ 0.81
FAM3A-222ENST00000621967 RANBP6O60518 1105 aaKnown RBP20.08■□□□□ 0.8
FAM3A-222ENST00000621967 USP17L8P0C7I0 530 aa20.08■□□□□ 0.8
FAM3A-222ENST00000621967 GMPSP49915 693 aaPredicted RBP20.08■□□□□ 0.8
FAM3A-222ENST00000621967 DPY19L2Q6NUT2 758 aa20.08■□□□□ 0.8
FAM3A-222ENST00000621967 MICU3Q86XE3 530 aa20.08■□□□□ 0.8
FAM3A-222ENST00000621967 TEKT1Q969V4 418 aa20.08■□□□□ 0.8
FAM3A-222ENST00000621967 C16orf45Q96MC5 204 aaPredicted RBP20.08■□□□□ 0.8
FAM3A-222ENST00000621967 MYH2Q9UKX2 1941 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 MBD4O95243 580 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 RXRAP19793 462 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 CCZ1BP86790 482 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 CCZ1P86791 482 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-222ENST00000621967 TMEM67Q5HYA8 995 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 ADGRA1Q86SQ6 560 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 NBPF11Q86T75 865 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 MAP3K14Q99558 947 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 NOL10Q9BSC4 688 aaKnown RBP20.07■□□□□ 0.8
FAM3A-222ENST00000621967 OSBPL5Q9H0X9 879 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-222ENST00000621967 NAPBQ9H115 298 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 CNNM2Q9H8M5 875 aa20.07■□□□□ 0.8
FAM3A-222ENST00000621967 GOLGA8AA7E2F4 631 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 SMTNL1A8MU46 457 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 RBM5P52756 815 aaKnown RBP eCLIP20.06■□□□□ 0.8
FAM3A-222ENST00000621967 ARID5BQ14865 1188 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 JMYQ8N9B5 988 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 MIGA1Q8NAN2 632 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 PHKBQ93100 1093 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 KCND1Q9NSA2 647 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 IMPACTQ9P2X3 320 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 TACC3Q9Y6A5 838 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 CCDC69A6NI79 296 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 GSG1L2A8MUP6 293 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 TNNT1P13805 278 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 CRKP46108 304 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 GSDMDP57764 484 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 HDLBPQ00341 1268 aaKnown RBP20.06■□□□□ 0.8
FAM3A-222ENST00000621967 ZRSR1Q15695 479 aaKnown RBP20.06■□□□□ 0.8
FAM3A-222ENST00000621967 DPF2Q92785 391 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 ZSWIM5Q9P217 1185 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 TUBE1Q9UJT0 475 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 SERPINA10Q9UK55 444 aa20.06■□□□□ 0.8
FAM3A-222ENST00000621967 DDNO94850 711 aaPredicted RBP20.05■□□□□ 0.8
FAM3A-222ENST00000621967 AKNAD1Q5T1N1 836 aa20.05■□□□□ 0.8
FAM3A-222ENST00000621967 HHIPL2Q6UWX4 724 aa20.05■□□□□ 0.8
FAM3A-222ENST00000621967 KRT23Q9C075 422 aa20.05■□□□□ 0.8
FAM3A-222ENST00000621967 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.05■□□□□ 0.8
FAM3A-222ENST00000621967 AATFQ9NY61 560 aaKnown RBP eCLIP20.05■□□□□ 0.8
FAM3A-222ENST00000621967 GAKO14976 1311 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 MAGEB6P1A0A0J9YX57 407 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 BAG3O95817 575 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 GNAT2P19087 354 aa20.04■□□□□ 0.8
FAM3A-222ENST00000621967 MARCKSP29966 332 aaPredicted RBP20.04■□□□□ 0.8
FAM3A-222ENST00000621967 CTDSPL2Q05D32 466 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms