RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 KRT79Q5XKE5 535 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ZKSCAN3Q9BRR0 538 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 EXOC6BQ9Y2D4 811 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 APOEP02649 317 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SLC9C1Q4G0N8 1177 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SPC25Q9HBM1 224 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ATP5J2-PTCD1G3V325 749 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SPOPO43791 374 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 GNAT2P19087 354 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 MCM7P33993 719 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 GUCY1B3Q02153 619 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 LRRC43Q8N309 656 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SPZ1Q9BXG8 430 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 TXLNGQ9NUQ3 528 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 FAM8A1Q9UBU6 413 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 AFF2P51816 1311 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 RIOK3O14730 519 aaKnown RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 TMPOP42166 694 aaKnown RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SLC39A6Q13433 755 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ATP2B3Q16720 1220 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 RTN1Q16799 776 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 NME8Q8N427 588 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 RILPQ96NA2 401 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 GLT8D2Q9H1C3 349 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 GPHNQ9NQX3 736 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 PCF11O94913 1555 aaKnown RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 U2AF2P26368 475 aaKnown RBP eCLIP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 HOXD10P28358 340 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 FAM160A1Q05DH4 1040 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 PSMD6Q15008 389 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 NBPF9Q3BBW0 867 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC84Q86UT8 332 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ST13P4Q8IZP2 240 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 KIFC2Q96AC6 838 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ZBED2Q9BTP6 218 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 CNPY2Q9Y2B0 182 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 COPG1Q9Y678 874 aaKnown RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SYCP2Q9BX26 1530 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC169A6NNP5 214 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 GNA11P29992 359 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 RAP1GDS1P52306 607 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 CCT2P78371 535 aaKnown RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 WDR44Q5JSH3 913 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 MCF2L2Q86YR7 1114 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 SPDL1Q96EA4 605 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ZNF830Q96NB3 372 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 ZNF445P59923 1031 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 TRIM68Q6AZZ1 485 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 TTC19Q6DKK2 380 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-205ENST00000620864 FAM196AQ6ZSG2 479 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 EYA3Q99504 573 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 YY1AP1Q9H869 796 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 FGFR1OP2Q9NVK5 253 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 KCNG1Q9UIX4 513 aa7.92□□□□□ -1.14
COLCA1-205ENST00000620864 MAN1A1P33908 653 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 ZNF449Q6P9G9 518 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 DPH6Q7L8W6 267 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CNBD1Q8NA66 436 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 MLKLQ8NB16 471 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 TRIM58Q8NG06 486 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 RRP36Q96EU6 259 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CRNKL1Q9BZJ0 848 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 NSFL1CQ9UNZ2 370 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 GOLGA8CPA6NN73 597 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 FMNL1O95466 1100 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 GCP02774 474 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 KRT15P19012 456 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 LMNB1P20700 586 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 KARSQ15046 597 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 RPS6KA2Q15349 733 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 KRT71Q3SY84 523 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 LRGUKQ96M69 825 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 BOLA2Q9H3K6 86 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CNOT10Q9H9A5 744 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 TRAPPC8Q9Y2L5 1435 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 PFDN6O15212 129 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 GAS2L1Q99501 681 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 A0A1B0GVL5 298 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 EIF3CLB5ME19 914 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 KRT2P35908 639 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 PDE6BP35913 854 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 NUCB1Q02818 461 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 UAP1Q16222 522 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 IGSF22Q8N9C0 903 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 JARID2Q92833 1246 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 EIF3CQ99613 913 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 ABCC5O15440 1437 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CALUO43852 315 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 FBXW10Q5XX13 1052 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 NBPF10Q6P3W6 841 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 PDZD8Q8NEN9 1154 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 TMEM110-MUSTN1A8MSY1 372 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 TMEM232C9JQI7 657 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 AFMP43652 599 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 NEK2P51955 445 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 TEX2Q8IWB9 1127 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CTAGE3PQ8IX95 158 aa7.91□□□□□ -1.14
COLCA1-205ENST00000620864 NIM1KQ8IY84 436 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms