RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 EIF3CLB5ME19 914 aaKnown RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 ATP8B1O43520 1251 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 MATR3P43243 847 aaKnown RBP eCLIP7.86□□□□□ -1.154e-6■□□□□ 8.9
NEDD9-216ENST00000620854 IRX3P78415 501 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 BRD3Q15059 726 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 RABL6Q3YEC7 729 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 MAP3K14Q99558 947 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 EIF3CQ99613 913 aaKnown RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 CSRNP2Q9H175 543 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 TFCP2L1Q9NZI6 479 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 RGPD8O14715 1765 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 ENOX2Q16206 610 aaKnown RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 TPTE2Q6XPS3 522 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 MICALL1Q8N3F8 863 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 UBXN6Q9BZV1 441 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 L1RE1Q9UN81 338 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 RNF225M0QZC1 329 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 IRS4O14654 1257 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 PPP6R2O75170 966 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 CD44P16070 742 aaKnown RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 TOB1P50616 345 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 TBX2Q13207 712 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.86□□□□□ -1.15
NEDD9-216ENST00000620854 NOSTRINQ8IVI9 506 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 CEP112Q8N8E3 955 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 APPBP2Q92624 585 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 PSMB7Q99436 277 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 CCDC87Q9NVE4 849 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 TAB2Q9NYJ8 693 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 SLIT1O75093 1534 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 UBN2Q6ZU65 1347 aa7.86□□□□□ -1.15
NEDD9-216ENST00000620854 PRDM1O75626 825 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NR1I3Q14994 352 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 KIAA1328Q86T90 577 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 PACS2Q86VP3 889 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 CHP1Q99653 195 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NAPBQ9H115 298 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ZSWIM5Q9P217 1185 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ARHGAP23Q9P227 1491 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NBPF26B4DH59 902 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 MAP2K7O14733 419 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ERCC3P19447 782 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 CDR1P51861 262 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 TTC31Q49AM3 519 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NBPF14Q5TI25 921 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NBPF10Q6P3W6 841 aaKnown RBP7.85□□□□□ -1.15
NEDD9-216ENST00000620854 FCHSD1Q86WN1 690 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ANKRD18AQ8IVF6 992 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NBPF15Q8N660 670 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 MLKLQ8NB16 471 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NYXQ9GZU5 481 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 EHD4Q9H223 541 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 PRM3Q9NNZ6 103 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 IQSEC3Q9UPP2 1182 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NWD1Q149M9 1564 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 RNF40O75150 1001 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 KRT9P35527 623 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 STIM1Q13586 685 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ZNF174Q15697 407 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ENOX1Q8TC92 643 aaKnown RBP7.85□□□□□ -1.15
NEDD9-216ENST00000620854 PLIN2Q99541 437 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 NAPGQ99747 312 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-216ENST00000620854 QTRT2Q9H974 415 aaKnown RBP7.85□□□□□ -1.15
NEDD9-216ENST00000620854 CTNND2Q9UQB3 1225 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 ZMYM6O95789 1325 aa7.85□□□□□ -1.15
NEDD9-216ENST00000620854 LIG3P49916 1009 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 MAP3K12Q12852 859 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 TRAPPC3LQ5T215 181 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 NBPF3Q9H094 633 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 VPS54Q9P1Q0 977 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 NCAPD2Q15021 1401 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 C6orf229H3BNL8 230 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 ZNF18P17022 549 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 MCAMP43121 646 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 MDM2Q00987 491 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-216ENST00000620854 SLC20A2Q08357 652 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 LRRC31Q6UY01 552 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 PAXIP1Q6ZW49 1069 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-216ENST00000620854 ASAP1Q9ULH1 1129 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 JRKLQ9Y4A0 524 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 ZNF532Q9HCE3 1301 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 CYP27B1O15528 508 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 PRKAB2O43741 272 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 IVLP07476 585 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 CASP7P55210 303 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 PARP10Q53GL7 1025 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 RRAGBQ5VZM2 374 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 CTR9Q6PD62 1173 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 MIGA1Q8NAN2 632 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 WWC3Q9ULE0 1092 aa7.84□□□□□ -1.15
NEDD9-216ENST00000620854 SETD1AO15047 1707 aaKnown RBP7.84□□□□□ -1.16
NEDD9-216ENST00000620854 A0A087X0B3 334 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 LOC102724159A0A0B4J2E5 919 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 H7C1W4 665 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 SMIM22K7EJ46 135 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 SH2B2O14492 632 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 ZNF185O15231 689 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 GYPCP04921 128 aa7.83□□□□□ -1.16
NEDD9-216ENST00000620854 PWP2Q15269 919 aaKnown RBP7.83□□□□□ -1.16
NEDD9-216ENST00000620854 KCTD19Q17RG1 926 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms