RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SDR42E1Q8WUS8 393 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 DPF3Q92784 378 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 ARMT1Q9H993 441 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 EMILIN3Q9NT22 766 aa19.36■□□□□ 0.69
CD40-207ENST00000620709 HOXA7P31268 230 aaPredicted RBP19.35■□□□□ 0.69
CD40-207ENST00000620709 GPRC5AQ8NFJ5 357 aa19.35■□□□□ 0.69
CD40-207ENST00000620709 U2AF1L4Q8WU68 220 aaKnown RBP19.35■□□□□ 0.69
CD40-207ENST00000620709 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
CD40-207ENST00000620709 TCRBV5S4A2TA0A5A2 114 aa19.35■□□□□ 0.69
CD40-207ENST00000620709 TFRCP02786 760 aaKnown RBP19.35■□□□□ 0.69
CD40-207ENST00000620709 SHMT1P34896 483 aa19.35■□□□□ 0.69
CD40-207ENST00000620709 EVX2Q03828 476 aa19.35■□□□□ 0.69
CD40-207ENST00000620709 DEFB118Q96PH6 123 aa19.35■□□□□ 0.69
CD40-207ENST00000620709 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.35■□□□□ 0.69
CD40-207ENST00000620709 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
CD40-207ENST00000620709 MBD4O95243 580 aa19.34■□□□□ 0.69
CD40-207ENST00000620709 CYP2D6P10635 497 aa19.34■□□□□ 0.69
CD40-207ENST00000620709 ATP5JP18859 108 aa19.34■□□□□ 0.69
CD40-207ENST00000620709 ACER1Q8TDN7 264 aa19.34■□□□□ 0.69
CD40-207ENST00000620709 TXNRD2Q9NNW7 524 aa19.34■□□□□ 0.69
CD40-207ENST00000620709 SGPL1O95470 568 aa19.33■□□□□ 0.68
CD40-207ENST00000620709 CYP2B6P20813 491 aa19.33■□□□□ 0.68
CD40-207ENST00000620709 HAUS7Q99871 368 aa19.33■□□□□ 0.68
CD40-207ENST00000620709 PRKAB2O43741 272 aa19.32■□□□□ 0.68
CD40-207ENST00000620709 FARP2O94887 1054 aaPredicted RBP19.32■□□□□ 0.68
CD40-207ENST00000620709 ADD2P35612 726 aa19.32■□□□□ 0.68
CD40-207ENST00000620709 USP14P54578 494 aa19.32■□□□□ 0.68
CD40-207ENST00000620709 SEPT2Q15019 361 aa19.32■□□□□ 0.68
CD40-207ENST00000620709 DCP1AQ9NPI6 582 aaPredicted RBP19.32■□□□□ 0.68
CD40-207ENST00000620709 RBPJLQ9UBG7 517 aa19.32■□□□□ 0.68
CD40-207ENST00000620709 USP17L15C9J2P7 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L13C9JLJ4 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L11C9JVI0 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L18D6R9N7 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L22D6RA61 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L17D6RBQ6 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L19D6RCP7 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L20D6RJB6 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 H0YGN5 161 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 CHGBP05060 677 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 ERVK-9P63128 1117 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 ERVK-24P63145 666 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 USP17L24Q0WX57 530 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 BACH2Q9BYV9 841 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 GJD2Q9UKL4 321 aa19.31■□□□□ 0.68
CD40-207ENST00000620709 DDX60LQ5H9U9 1706 aaKnown RBP19.31■□□□□ 0.68
CD40-207ENST00000620709 HMGCRP04035 888 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 TRIM32Q13049 653 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 Q3C1V9 767 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 WDR78Q5VTH9 848 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 SLC44A5Q8NCS7 719 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 DYNLL2Q96FJ2 89 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 NUDT12Q9BQG2 462 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 HTATIP2Q9BUP3 242 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 VCAM1P19320 739 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 MAPK4P31152 587 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 GUCY1A2P33402 732 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 HABP4Q5JVS0 413 aaKnown RBP19.3■□□□□ 0.68
CD40-207ENST00000620709 PLEKHM2Q8IWE5 1019 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 GTF3C2Q8WUA4 911 aaPredicted RBP19.3■□□□□ 0.68
CD40-207ENST00000620709 KIAA1683Q9H0B3 1180 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.3■□□□□ 0.68
CD40-207ENST00000620709 PORCNQ9H237 461 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 CEP290O15078 2479 aa19.3■□□□□ 0.68
CD40-207ENST00000620709 GABPAQ06546 454 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 C8orf34Q49A92 452 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 ZSCAN25Q6NSZ9 544 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 CATSPERGQ6ZRH7 1159 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 C12orf42Q96LP6 360 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 RPAP3Q9H6T3 665 aaPredicted RBP19.29■□□□□ 0.68
CD40-207ENST00000620709 SLC4A4Q9Y6R1 1079 aa19.29■□□□□ 0.68
CD40-207ENST00000620709 BAZ2AQ9UIF9 1905 aaKnown RBP19.28■□□□□ 0.68
CD40-207ENST00000620709 CYP2D7A0A087X1C5 515 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 PLEKHH3Q7Z736 793 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 SOCS4Q8WXH5 440 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 TRIB2Q92519 343 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 HMX1Q9NP08 348 aaPredicted RBP19.28■□□□□ 0.68
CD40-207ENST00000620709 PAK6Q9NQU5 681 aaPredicted RBP19.28■□□□□ 0.68
CD40-207ENST00000620709 ATP8A2Q9NTI2 1148 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 MYH7P12883 1935 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 PLXNB2O15031 1838 aa19.28■□□□□ 0.68
CD40-207ENST00000620709 BMP2KLQ5H9B9 411 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 GPR142Q7Z601 462 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 GPATCH3Q96I76 525 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 ECHDC1Q9NTX5 307 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 SWAP70Q9UH65 585 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 COLQQ9Y215 455 aaPredicted RBP19.27■□□□□ 0.68
CD40-207ENST00000620709 RABGAP1Q9Y3P9 1069 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 MYH8P13535 1937 aa19.27■□□□□ 0.68
CD40-207ENST00000620709 CCNA1P78396 465 aa19.26■□□□□ 0.67
CD40-207ENST00000620709 UBE3CQ15386 1083 aa19.26■□□□□ 0.67
CD40-207ENST00000620709 POTEEQ6S8J3 1075 aa19.26■□□□□ 0.67
CD40-207ENST00000620709 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
CD40-207ENST00000620709 UBE2Q1Q7Z7E8 422 aa19.26■□□□□ 0.67
CD40-207ENST00000620709 TANGO6Q9C0B7 1094 aa19.26■□□□□ 0.67
CD40-207ENST00000620709 RPTORQ8N122 1335 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms