RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 FAM160A1Q05DH4 1040 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 OXER1Q8TDS5 423 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 CNKSR1Q969H4 720 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 PPP1R9BQ96SB3 815 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 ZNF287Q9HBT7 754 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 SUGT1Q9Y2Z0 365 aa23.28■■□□□ 1.32
MMP28-207ENST00000619655 DDX60LQ5H9U9 1706 aaKnown RBP23.27■■□□□ 1.32
MMP28-207ENST00000619655 PRPF3O43395 683 aaKnown RBP23.27■■□□□ 1.32
MMP28-207ENST00000619655 XBP1P17861 261 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 TYRO3Q06418 890 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 C16orf86Q6ZW13 317 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 PODNQ7Z5L7 613 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 DGKHQ86XP1 1220 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 KIAA0825Q8IV33 1275 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 SHISA4Q96DD7 197 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 USP40Q9NVE5 1235 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 CNTNAP5Q8WYK1 1306 aa23.27■■□□□ 1.32
MMP28-207ENST00000619655 ECE2O60344 883 aa23.26■■□□□ 1.31
MMP28-207ENST00000619655 BAG6P46379 1132 aa23.26■■□□□ 1.31
MMP28-207ENST00000619655 NDUFA8P51970 172 aa23.26■■□□□ 1.31
MMP28-207ENST00000619655 SLC39A14Q15043 492 aa23.26■■□□□ 1.31
MMP28-207ENST00000619655 AOC3Q16853 763 aa23.26■■□□□ 1.31
MMP28-207ENST00000619655 ATP2B1P20020 1258 aa23.26■■□□□ 1.31
MMP28-207ENST00000619655 KIF5BP33176 963 aa23.25■■□□□ 1.31
MMP28-207ENST00000619655 SASS6Q6UVJ0 657 aa23.25■■□□□ 1.31
MMP28-207ENST00000619655 ENGASEQ8NFI3 743 aa23.25■■□□□ 1.31
MMP28-207ENST00000619655 TEKT1Q969V4 418 aa23.25■■□□□ 1.31
MMP28-207ENST00000619655 MAP3K14Q99558 947 aa23.25■■□□□ 1.31
MMP28-207ENST00000619655 FOXP1Q9H334 677 aaPredicted RBP23.25■■□□□ 1.31
MMP28-207ENST00000619655 DDX4Q9NQI0 724 aaKnown RBP23.25■■□□□ 1.31
MMP28-207ENST00000619655 WDHD1O75717 1129 aaPredicted RBP23.25■■□□□ 1.31
MMP28-207ENST00000619655 MRVI1Q9Y6F6 885 aa23.25■■□□□ 1.31
MMP28-207ENST00000619655 A0A1W2PQ27 194 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 A0A1W2PQ64 194 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 A0A1W2PQD8 194 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 C21orf2O43822 256 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 PLCB2Q00722 1185 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 RBM43Q6ZSC3 357 aaKnown RBP23.24■■□□□ 1.31
MMP28-207ENST00000619655 STAG2Q8N3U4 1231 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 FOCADQ5VW36 1801 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 SNED1Q8TER0 1413 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 RBM5P52756 815 aaKnown RBP eCLIP23.24■■□□□ 1.31
MMP28-207ENST00000619655 PTPAQ15257 358 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 ERCC4Q92889 916 aaPredicted RBP23.24■■□□□ 1.31
MMP28-207ENST00000619655 CABP5Q9NP86 173 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 USP25Q9UHP3 1055 aa23.24■■□□□ 1.31
MMP28-207ENST00000619655 ANO6Q4KMQ2 910 aa23.23■■□□□ 1.31
MMP28-207ENST00000619655 FMR1NBQ8N0W7 255 aaPredicted RBP23.23■■□□□ 1.31
MMP28-207ENST00000619655 TMEM47Q9BQJ4 181 aa23.23■■□□□ 1.31
MMP28-207ENST00000619655 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
MMP28-207ENST00000619655 PCDHAC2Q9Y5I4 1007 aa23.23■■□□□ 1.31
MMP28-207ENST00000619655 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
MMP28-207ENST00000619655 TOB1P50616 345 aaPredicted RBP23.22■■□□□ 1.31
MMP28-207ENST00000619655 AXDND1Q5T1B0 1012 aaPredicted RBP23.22■■□□□ 1.31
MMP28-207ENST00000619655 CDC42EP5Q6NZY7 148 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 RASGRP2Q7LDG7 609 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 CLIC6Q96NY7 704 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 PHF20Q9BVI0 1012 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 TCP11L1Q9NUJ3 509 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 SCN9AQ15858 1988 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 KRT2P35908 639 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 CRKP46108 304 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 CCDC178Q5BJE1 867 aa23.22■■□□□ 1.31
MMP28-207ENST00000619655 FAM205CA6NFA0 338 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 VEGFAP15692 232 aaPredicted RBP23.21■■□□□ 1.31
MMP28-207ENST00000619655 NT5C2P49902 561 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 APOBEC3HQ6NTF7 200 aaKnown RBP23.21■■□□□ 1.31
MMP28-207ENST00000619655 JMYQ8N9B5 988 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 SDF4Q9BRK5 362 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 GOLGA8HP0CJ92 632 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 CACNB3P54284 484 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 C7orf43Q8WVR3 580 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 PDLIM2Q96JY6 352 aa23.21■■□□□ 1.31
MMP28-207ENST00000619655 PPP6R2O75170 966 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 SCG2P13521 617 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 PFKFB1P16118 471 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 UVSSAQ2YD98 709 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 RILPL1Q5EBL4 403 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 STRIP1Q5VSL9 837 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 HHIPL2Q6UWX4 724 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 ANKS1AQ92625 1134 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 CEP95Q96GE4 821 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 MAD2L2Q9UI95 211 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 PCDHB6Q9Y5E3 794 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 CTAGE5O15320 804 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 NFIAQ12857 509 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 DACT2Q5SW24 774 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 KLHL34Q8N239 644 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 NEDD1Q8NHV4 660 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 DNAJC25Q9H1X3 360 aa23.2■■□□□ 1.3
MMP28-207ENST00000619655 A0A087WWV3 80 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 GRM4Q14833 912 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 EARS2Q5JPH6 523 aaKnown RBP23.19■■□□□ 1.3
MMP28-207ENST00000619655 FAM200AQ8TCP9 573 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 BRMS1Q9HCU9 246 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 PPIP5K2O43314 1243 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 CMA1P23946 247 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 LUZP1Q86V48 1076 aa23.19■■□□□ 1.3
MMP28-207ENST00000619655 GPKOWQ92917 476 aaPredicted RBP eCLIP23.19■■□□□ 1.3
MMP28-207ENST00000619655 EIF6P56537 245 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms