RNA–Protein interactions for RNA: ENST00000619396.4

KHSRP-213, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KHSRP, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-213ENST00000619396 TRIM65Q6PJ69 517 aa34.38■■■■□ 3.09
KHSRP-213ENST00000619396 TXNRD3Q86VQ6 643 aa34.38■■■■□ 3.09
KHSRP-213ENST00000619396 TBX2Q13207 712 aaPredicted RBP34.37■■■■□ 3.09
KHSRP-213ENST00000619396 TPTE2Q6XPS3 522 aa34.37■■■■□ 3.09
KHSRP-213ENST00000619396 TMEM139Q8IV31 216 aa34.37■■■■□ 3.09
KHSRP-213ENST00000619396 REXO1L1PQ8IX06 675 aa34.37■■■■□ 3.09
KHSRP-213ENST00000619396 OXER1Q8TDS5 423 aa34.37■■■■□ 3.09
KHSRP-213ENST00000619396 ZNF18P17022 549 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 TM4SF1P30408 202 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 MORC3Q14149 939 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 MLKLQ8NB16 471 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 MYH2Q9UKX2 1941 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 FMR1Q06787 632 aaKnown RBP eCLIP34.36■■■■□ 3.091e-7■□□□□ 10.4
KHSRP-213ENST00000619396 GOLGA8FQ08AF8 430 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 GOLGA8DPQ0D2H9 430 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 PHLPP2Q6ZVD8 1323 aa34.36■■■■□ 3.09
KHSRP-213ENST00000619396 SEC23AQ15436 765 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 PTPN21Q16825 1174 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 FCHSD1Q86WN1 690 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 LRRN4CLQ8ND94 238 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 TAF1LQ8IZX4 1826 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 EP400Q96L91 3159 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 ENOX1Q8TC92 643 aaKnown RBP34.35■■■■□ 3.09
KHSRP-213ENST00000619396 FAM53CQ9NYF3 392 aa34.35■■■■□ 3.09
KHSRP-213ENST00000619396 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP34.35■■■■□ 3.092e-7■■■□□ 18.1
KHSRP-213ENST00000619396 RGL2O15211 777 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 ACTN4O43707 911 aaKnown RBP34.34■■■■□ 3.09
KHSRP-213ENST00000619396 HOMER1Q86YM7 354 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 NUP133Q8WUM0 1156 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 SHISA4Q96DD7 197 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 ANAPC4Q9UJX5 808 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 TNRC6CQ9HCJ0 1690 aaKnown RBP34.34■■■■□ 3.09
KHSRP-213ENST00000619396 MYH13Q9UKX3 1938 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 PRDM1O75626 825 aa34.34■■■■□ 3.09
KHSRP-213ENST00000619396 NSUN4Q96CB9 384 aaKnown RBP34.34■■■■□ 3.09
KHSRP-213ENST00000619396 MECOMQ03112 1051 aa34.33■■■■□ 3.09
KHSRP-213ENST00000619396 TRIML1Q8N9V2 468 aa34.33■■■■□ 3.09
KHSRP-213ENST00000619396 SMARCE1Q969G3 411 aa34.33■■■■□ 3.09
KHSRP-213ENST00000619396 HIBADHP31937 336 aaKnown RBP34.32■■■■□ 3.09
KHSRP-213ENST00000619396 SPATA20Q8TB22 786 aa34.32■■■■□ 3.09
KHSRP-213ENST00000619396 MED15Q96RN5 788 aa34.32■■■■□ 3.09
KHSRP-213ENST00000619396 CEP131Q9UPN4 1083 aa34.32■■■■□ 3.09
KHSRP-213ENST00000619396 NPHP1O15259 732 aa34.32■■■■□ 3.08
KHSRP-213ENST00000619396 PRDX5P30044 214 aa34.32■■■■□ 3.08
KHSRP-213ENST00000619396 NOL10Q9BSC4 688 aaKnown RBP34.32■■■■□ 3.08
KHSRP-213ENST00000619396 UBAC1Q9BSL1 405 aa34.32■■■■□ 3.08
KHSRP-213ENST00000619396 RNF26Q9BY78 433 aaPredicted RBP34.32■■■■□ 3.08
KHSRP-213ENST00000619396 CABP5Q9NP86 173 aa34.32■■■■□ 3.08
KHSRP-213ENST00000619396 DNAI1Q9UI46 699 aa34.32■■■■□ 3.08
KHSRP-213ENST00000619396 NFE2L3Q9Y4A8 694 aa34.32■■■■□ 3.08
KHSRP-213ENST00000619396 ERCC6LQ2NKX8 1250 aa34.31■■■■□ 3.08
KHSRP-213ENST00000619396 USP49Q70CQ1 688 aa34.31■■■■□ 3.08
KHSRP-213ENST00000619396 GRAMD1CQ8IYS0 662 aa34.31■■■■□ 3.08
KHSRP-213ENST00000619396 FANCGO15287 622 aa34.31■■■■□ 3.08
KHSRP-213ENST00000619396 CSRNP2Q9H175 543 aa34.31■■■■□ 3.08
KHSRP-213ENST00000619396 DACH1Q9UI36 760 aa34.31■■■■□ 3.08
KHSRP-213ENST00000619396 TNKSO95271 1327 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 ARHGAP6O43182 974 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 H2AFXP16104 143 aaPredicted RBP34.3■■■■□ 3.08
KHSRP-213ENST00000619396 PPP2R5BQ15173 497 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 KANK3Q6NY19 840 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 AATFQ9NY61 560 aaKnown RBP eCLIP34.3■■■■□ 3.08
KHSRP-213ENST00000619396 RFC4P35249 363 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 ZNF827Q17R98 1081 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 FAM196AQ6ZSG2 479 aa34.3■■■■□ 3.08
KHSRP-213ENST00000619396 PKN1Q16512 942 aa34.29■■■■□ 3.08
KHSRP-213ENST00000619396 HSP90AA4PQ58FG1 418 aa34.29■■■■□ 3.08
KHSRP-213ENST00000619396 LY75O60449 1722 aa34.29■■■■□ 3.08
KHSRP-213ENST00000619396 FUT2Q10981 343 aa34.28■■■■□ 3.08
KHSRP-213ENST00000619396 CTR9Q6PD62 1173 aa34.28■■■■□ 3.08
KHSRP-213ENST00000619396 ESR2Q92731 530 aa34.28■■■■□ 3.08
KHSRP-213ENST00000619396 PDILTQ8N807 584 aa34.28■■■■□ 3.08
KHSRP-213ENST00000619396 GJD4Q96KN9 370 aaPredicted RBP34.28■■■■□ 3.08
KHSRP-213ENST00000619396 ANKRD2Q9GZV1 360 aa34.28■■■■□ 3.08
KHSRP-213ENST00000619396 ATP2B1P20020 1258 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 LRRC4BQ9NT99 713 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 ZNF446Q9NWS9 450 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 SBF2Q86WG5 1849 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 USP17L12C9JPN9 530 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 USP17L21D6R901 530 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 ZSCAN12O43309 604 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 TRMT44Q8IYL2 757 aaKnown RBP34.27■■■■□ 3.08
KHSRP-213ENST00000619396 TC2NQ8N9U0 490 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 BRIP1Q9BX63 1249 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 PPP2R2CQ9Y2T4 447 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 DUOX1Q9NRD9 1551 aa34.27■■■■□ 3.08
KHSRP-213ENST00000619396 VWA3AA6NCI4 1184 aa34.26■■■■□ 3.08
KHSRP-213ENST00000619396 NFIXQ14938 502 aa34.26■■■■□ 3.08
KHSRP-213ENST00000619396 TRAPPC3LQ5T215 181 aa34.26■■■■□ 3.08
KHSRP-213ENST00000619396 SPECC1LQ69YQ0 1117 aa34.26■■■■□ 3.08
KHSRP-213ENST00000619396 ENAHQ8N8S7 591 aaPredicted RBP34.26■■■■□ 3.08
KHSRP-213ENST00000619396 FAM205CA6NFA0 338 aa34.26■■■■□ 3.07
KHSRP-213ENST00000619396 SEMA3EO15041 775 aa34.26■■■■□ 3.07
KHSRP-213ENST00000619396 CDK11BP21127 795 aaKnown RBP34.26■■■■□ 3.07
KHSRP-213ENST00000619396 BAG1Q99933 345 aaPredicted RBP34.26■■■■□ 3.07
KHSRP-213ENST00000619396 PHF20Q9BVI0 1012 aa34.26■■■■□ 3.07
KHSRP-213ENST00000619396 ERCC5P28715 1186 aaPredicted RBP34.24■■■■□ 3.07
KHSRP-213ENST00000619396 PLCD1P51178 756 aa34.24■■■■□ 3.07
KHSRP-213ENST00000619396 GABPB1Q06547 395 aaPredicted RBP34.24■■■■□ 3.07
KHSRP-213ENST00000619396 EARS2Q5JPH6 523 aaKnown RBP34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms