RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	MORC3	Q14149	939 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	PPP2R5B	Q15173	497 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	KLHL10	Q6JEL2	608 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	STAM	Q92783	540 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	MED15	Q96RN5	788 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	KCND1	Q9NSA2	647 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	TAF1	P21675	1872 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	ADAMTS3	O15072	1205 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	SLC10A5	Q5PT55	438 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	MLKL	Q8NB16	471 aa		12.8	□□□□□ -0.36
TP53-223	ENST00000618944	SYMPK	Q92797	1274 aa	Known RBP	12.8	□□□□□ -0.36
TP53-223	ENST00000618944	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.8	□□□□□ -0.36
TP53-223	ENST00000618944	RBM28	Q9NW13	759 aa	Known RBP	12.8	□□□□□ -0.36
TP53-223	ENST00000618944	DOCK2	Q92608	1830 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	PSD	A5PKW4	1024 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	GNPAT	O15228	680 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	COBL	O75128	1261 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	ZPR1	O75312	459 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	STX17	P56962	302 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	NT5DC1	Q5TFE4	455 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	TMTC3	Q6ZXV5	915 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	ELOA2	Q8IYF1	753 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	CTCFL	Q8NI51	663 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	MCM9	Q9NXL9	1143 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	TIAM2	Q8IVF5	1701 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	VWA3A	A6NCI4	1184 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	TSPY2	A6NKD2	308 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	FGR	P09769	529 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	USP17L8	P0C7I0	530 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	ADK	P55263	362 aa	Known RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	NLRP5	P59047	1200 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	AMIGO3	Q86WK7	504 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	FAM177A1	Q8N128	213 aa	Predicted RBP	12.79	□□□□□ -0.36
TP53-223	ENST00000618944	MTMR7	Q9Y216	660 aa		12.79	□□□□□ -0.36
TP53-223	ENST00000618944	CALM1	P0DP23	149 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	CALM2	P0DP24	149 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	CALM3	P0DP25	149 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	PTGDR	Q13258	359 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	NPY5R	Q15761	445 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	KANK3	Q6NY19	840 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	PIK3AP1	Q6ZUJ8	805 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	ENOX1	Q8TC92	643 aa	Known RBP	12.78	□□□□□ -0.36
TP53-223	ENST00000618944	PAGE5	Q96GU1	130 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	C8orf37	Q96NL8	207 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	BRMS1	Q9HCU9	246 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TP53-223	ENST00000618944	CIC	Q96RK0	1608 aa	Predicted RBP	12.78	□□□□□ -0.36
TP53-223	ENST00000618944	PLCH1	Q4KWH8	1693 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	SYCP1	Q15431	976 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	TTC38	Q5R3I4	469 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	TPTE2	Q6XPS3	522 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	LRRN4CL	Q8ND94	238 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	NYX	Q9GZU5	481 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	TMX1	Q9H3N1	280 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	NARF	Q9UHQ1	456 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	DACH1	Q9UI36	760 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	DNAI1	Q9UI46	699 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	ECM29	Q5VYK3	1845 aa		12.78	□□□□□ -0.36
TP53-223	ENST00000618944	SEMA3E	O15041	775 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	SLU7	O95391	586 aa	Known RBP	12.77	□□□□□ -0.37
TP53-223	ENST00000618944	CD44	P16070	742 aa	Known RBP	12.77	□□□□□ -0.37
TP53-223	ENST00000618944	ZNF18	P17022	549 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	MCM7	P33993	719 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	ELF2	Q15723	593 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	DZIP1	Q86YF9	867 aa	Known RBP	12.77	□□□□□ -0.37
TP53-223	ENST00000618944	DYNLL2	Q96FJ2	89 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	NGLY1	Q96IV0	654 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	GPR101	Q96P66	508 aa	Predicted RBP	12.77	□□□□□ -0.37
TP53-223	ENST00000618944	ANKRD2	Q9GZV1	360 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	BCOR	Q6W2J9	1755 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	KIF2A	O00139	706 aa	Predicted RBP	12.77	□□□□□ -0.37
TP53-223	ENST00000618944	DDAH1	O94760	285 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	SLFN14	P0C7P3	912 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	TFAP4	Q01664	338 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	TNFRSF25	Q93038	417 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	BLZF1	Q9H2G9	400 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	ANKIB1	Q9P2G1	1089 aa		12.77	□□□□□ -0.37
TP53-223	ENST00000618944	PHLPP1	O60346	1717 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	ORC4	O43929	436 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	RPS6KA4	O75676	772 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	TM4SF1	P30408	202 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	PLCD1	P51178	756 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	DHX8	Q14562	1220 aa	Known RBP	12.76	□□□□□ -0.37
TP53-223	ENST00000618944	SPATA20	Q8TB22	786 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	ARHGEF1	Q92888	912 aa	Known RBP	12.76	□□□□□ -0.37
TP53-223	ENST00000618944	ATP8A2	Q9NTI2	1148 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	CNTNAP5	Q8WYK1	1306 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	CHD4	Q14839	1912 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	TEX33	O43247	280 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	PC	P11498	1178 aa	Known RBP	12.76	□□□□□ -0.37
TP53-223	ENST00000618944	SCG2	P13521	617 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	CDC25A	P30304	524 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	USP5	P45974	858 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	GRIK5	Q16478	980 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	SPECC1L	Q69YQ0	1117 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	TRIML1	Q8N9V2	468 aa		12.76	□□□□□ -0.37
TP53-223	ENST00000618944	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.76	□□□□□ -0.37
TP53-223	ENST00000618944	ERO1A	Q96HE7	468 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms