RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 TFCP2L1Q9NZI6 479 aa22.02■■□□□ 1.12
PCDHGB3-202ENST00000618934 HOOK1Q9UJC3 728 aaKnown RBP22.02■■□□□ 1.12
PCDHGB3-202ENST00000618934 JAG2Q9Y219 1238 aa22.02■■□□□ 1.12
PCDHGB3-202ENST00000618934 COL22A1Q8NFW1 1626 aaPredicted RBP22.02■■□□□ 1.12
PCDHGB3-202ENST00000618934 PRPF3O43395 683 aaKnown RBP22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 CYP2D6P10635 497 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 ADKP55263 362 aaKnown RBP22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 ZNF174Q15697 407 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 CAVIN4Q5BKX8 364 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 FAM47AQ5JRC9 791 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 FBXO38Q6PIJ6 1188 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 PTF1AQ7RTS3 328 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 MLKLQ8NB16 471 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 BRIP1Q9BX63 1249 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 DNAI1Q9UI46 699 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 CD44P16070 742 aaKnown RBP22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 KRT2P35908 639 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 SLC4A8Q2Y0W8 1093 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 TBC1D9BQ66K14 1250 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 CATIPQ7Z7H3 387 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 SLC51AQ86UW1 340 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 ENOX1Q8TC92 643 aaKnown RBP22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 NSUN4Q96CB9 384 aaKnown RBP22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
PCDHGB3-202ENST00000618934 CDK11BP21127 795 aaKnown RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 MECOMQ03112 1051 aa22■■□□□ 1.11
PCDHGB3-202ENST00000618934 ERCC6LQ2NKX8 1250 aa22■■□□□ 1.11
PCDHGB3-202ENST00000618934 SRBD1Q8N5C6 995 aaKnown RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 SYMPKQ92797 1274 aaKnown RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 AATFQ9NY61 560 aaKnown RBP eCLIP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 CEP131Q9UPN4 1083 aa22■■□□□ 1.11
PCDHGB3-202ENST00000618934 NUTM2BA6NNL0 878 aaPredicted RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 NUTM2EB1AL46 878 aaPredicted RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 FGRP09769 529 aa22■■□□□ 1.11
PCDHGB3-202ENST00000618934 ETF1P62495 437 aaKnown RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 FBXO33Q7Z6M2 555 aa22■■□□□ 1.11
PCDHGB3-202ENST00000618934 NUTM2AQ8IVF1 878 aaPredicted RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 DDX41Q9UJV9 622 aaKnown RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 THRAP3Q9Y2W1 955 aaKnown RBP22■■□□□ 1.11
PCDHGB3-202ENST00000618934 NRDCO43847 1150 aa21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 CLEC4GQ6UXB4 293 aa21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 SMYD4Q8IYR2 804 aaPredicted RBP21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 TC2NQ8N9U0 490 aa21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 STAMQ92783 540 aa21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 TNFRSF25Q93038 417 aa21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 FEZ1Q99689 392 aa21.99■■□□□ 1.11
PCDHGB3-202ENST00000618934 NRAPQ86VF7 1730 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 SCN7AQ01118 1682 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 SPATA31A5Q5VU36 1347 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 SPATA31A7Q8IWB4 1347 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 PRDX5P30044 214 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 STX17P56962 302 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 KLHL10Q6JEL2 608 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 TMTC3Q6ZXV5 915 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 PAGE5Q96GU1 130 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 OGFRQ9NZT2 677 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 MYO1BO43795 1136 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 COBLO75128 1261 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 DHX8Q14562 1220 aaKnown RBP21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 IQCA1Q86XH1 822 aa21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 FAM177A1Q8N128 213 aaPredicted RBP21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 ZNF397Q8NF99 534 aaPredicted RBP21.98■■□□□ 1.11
PCDHGB3-202ENST00000618934 CNTNAP5Q8WYK1 1306 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 VWA3AA6NCI4 1184 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 TEX33O43247 280 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 IGSF3O75054 1194 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 PLCD1P51178 756 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 PPP2R5BQ15173 497 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 SH3RF1Q7Z6J0 888 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 TXNRD3Q86VQ6 643 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 DCP1AQ9NPI6 582 aaPredicted RBP21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 SRP68Q9UHB9 627 aaKnown RBP21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 XBP1P17861 261 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 TOGARAM2Q6ZUX3 1019 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 APTXQ7Z2E3 356 aaKnown RBP21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 PPP2R2CQ9Y2T4 447 aa21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.97■■□□□ 1.11
PCDHGB3-202ENST00000618934 NR1I3Q14994 352 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 SPECC1LQ69YQ0 1117 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 BAG1Q99933 345 aaPredicted RBP21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 SLFN14P0C7P3 912 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 DMTNQ08495 405 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 PTGDRQ13258 359 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 KANK3Q6NY19 840 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 TRIML1Q8N9V2 468 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 ZNF446Q9NWS9 450 aa21.96■■□□□ 1.11
PCDHGB3-202ENST00000618934 DLEC1Q9Y238 1755 aa21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 IL17AQ16552 155 aa21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 RBM28Q9NW13 759 aaKnown RBP21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 AHDC1Q5TGY3 1603 aaPredicted RBP21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 RPS8P62241 208 aaKnown RBP21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 DPYDQ12882 1025 aa21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 CUL4BQ13620 913 aa21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 TTC38Q5R3I4 469 aa21.95■■□□□ 1.1
PCDHGB3-202ENST00000618934 ARHGAP6O43182 974 aa21.94■■□□□ 1.1
PCDHGB3-202ENST00000618934 MTF1Q14872 753 aa21.94■■□□□ 1.1
PCDHGB3-202ENST00000618934 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms