RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 TNRC6CQ9HCJ0 1690 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 CTIFO43310 598 aaKnown RBP19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 TM4SF1P30408 202 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 CEP135Q66GS9 1140 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 CATIPQ7Z7H3 387 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 PHF20Q9BVI0 1012 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 MAN1B1Q9UKM7 699 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 LAMB1P07942 1786 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 ADAMTS3O15072 1205 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 RPS6KA4O75676 772 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 GSDMDP57764 484 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 TPM4P67936 248 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 NAA30Q147X3 362 aaPredicted RBP19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 NGLY1Q96IV0 654 aa19.28■□□□□ 0.68
SEMA3B-213ENST00000618865 A0A087X0B3 334 aa19.27■□□□□ 0.68
SEMA3B-213ENST00000618865 TMEM232C9JQI7 657 aa19.27■□□□□ 0.68
SEMA3B-213ENST00000618865 VEGFAP15692 232 aaPredicted RBP19.27■□□□□ 0.68
SEMA3B-213ENST00000618865 POSTNQ15063 836 aa19.27■□□□□ 0.68
SEMA3B-213ENST00000618865 SRPRBQ9Y5M8 271 aaKnown RBP19.27■□□□□ 0.68
SEMA3B-213ENST00000618865 KCNA4P22459 653 aa19.27■□□□□ 0.67
SEMA3B-213ENST00000618865 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.67
SEMA3B-213ENST00000618865 GOLGA8FQ08AF8 430 aa19.27■□□□□ 0.67
SEMA3B-213ENST00000618865 GOLGA8DPQ0D2H9 430 aa19.27■□□□□ 0.67
SEMA3B-213ENST00000618865 NPY5RQ15761 445 aa19.27■□□□□ 0.67
SEMA3B-213ENST00000618865 KIAA1551Q9HCM1 1747 aa19.27■□□□□ 0.67
SEMA3B-213ENST00000618865 PRPF3O43395 683 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 FAM193AP78312 1265 aa19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 FMR1Q06787 632 aaKnown RBP eCLIP19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 E4F1Q66K89 784 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 FAM43BQ6ZT52 329 aaPredicted RBP19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 IQCA1Q86XH1 822 aa19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 SRBD1Q8N5C6 995 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 ACTN4O43707 911 aaKnown RBP19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 ZPR1O75312 459 aa19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 NYXQ9GZU5 481 aa19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 CCDC88AQ3V6T2 1871 aa19.26■□□□□ 0.67
SEMA3B-213ENST00000618865 SEMA3EO15041 775 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 UBASH3AP57075 661 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 ARHGEF1Q92888 912 aaKnown RBP19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 EPSTI1Q96J88 318 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 IRS2Q9Y4H2 1338 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 SBF2Q86WG5 1849 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 SERPINC1P01008 464 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 KRT2P35908 639 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 VPS72Q15906 364 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 TMTC3Q6ZXV5 915 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 INTS13Q9NVM9 706 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 CNTNAP5Q8WYK1 1306 aa19.25■□□□□ 0.67
SEMA3B-213ENST00000618865 PTPN14Q15678 1187 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 TRMT44Q8IYL2 757 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 MED15Q96RN5 788 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 USP17L8P0C7I0 530 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 CASP1P29466 404 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 RC3H1Q5TC82 1133 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 ZNF579Q8NAF0 562 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 CCNL1Q9UK58 526 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 EP400Q96L91 3159 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 SFPQP23246 707 aaKnown RBP eCLIP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 SARSP49591 514 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 TNFRSF25Q93038 417 aa19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
SEMA3B-213ENST00000618865 TRIM75PA6NK02 468 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 MYCNP04198 464 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 PPP2R5BQ15173 497 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 GRIK5Q16478 980 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 CFAP100Q494V2 611 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 TPTE2Q6XPS3 522 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 SMAP1Q8IYB5 467 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 CCDC150Q8NCX0 1101 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 ANKRD2Q9GZV1 360 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 MAST2Q6P0Q8 1798 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 ORC4O43929 436 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 NCBP1Q09161 790 aaKnown RBP19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 ZNF174Q15697 407 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 ANKRD7Q92527 254 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 DHX58Q96C10 678 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 PAXBP1Q9Y5B6 917 aa19.23■□□□□ 0.67
SEMA3B-213ENST00000618865 NT5DC1Q5TFE4 455 aa19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 CCDC112Q8NEF3 446 aa19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 RBM28Q9NW13 759 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 CEP131Q9UPN4 1083 aa19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 DDAH1O94760 285 aa19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 MORC3Q14149 939 aa19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 RCSD1Q6JBY9 416 aa19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 ELOA2Q8IYF1 753 aaPredicted RBP19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 RTCBQ9Y3I0 505 aaKnown RBP19.22■□□□□ 0.67
SEMA3B-213ENST00000618865 PDS5AQ29RF7 1337 aaKnown RBP19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 CERS3Q8IU89 383 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 SMARCE1Q969G3 411 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 PPP1R13BQ96KQ4 1090 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 KCND1Q9NSA2 647 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 TAF1LQ8IZX4 1826 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 XBP1P17861 261 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 NFIXQ14938 502 aa19.21■□□□□ 0.67
SEMA3B-213ENST00000618865 DYNLL2Q96FJ2 89 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms