RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 KCNJ14Q9UNX9 436 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 CACNA1SQ13698 1873 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 GOLGA8AA7E2F4 631 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 POTECB2RU33 542 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 BTBD18B2RXH4 712 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 DHX16O60231 1041 aaKnown RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 SMC2O95347 1197 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 APPP05067 770 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 EVA1CP58658 441 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 FANCCQ00597 558 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 CHAF1AQ13111 956 aaPredicted RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 NR5A1Q13285 461 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 PUM3Q15397 648 aaKnown RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 ALX1Q15699 326 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 NOM1Q5C9Z4 860 aaKnown RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 TMEM67Q5HYA8 995 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 EARS2Q5JPH6 523 aaKnown RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 INTS5Q6P9B9 1019 aaKnown RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 USP49Q70CQ1 688 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 DZIP3Q86Y13 1208 aaKnown RBP4.99□□□□□ -1.61
SEC22B-202ENST00000618538 TMEM139Q8IV31 216 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 ZNF384Q8TF68 577 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 LPIN2Q92539 896 aa4.99□□□□□ -1.61
SEC22B-202ENST00000618538 LAMB2P55268 1798 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 CASZ1Q86V15 1759 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 COL22A1Q8NFW1 1626 aaPredicted RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 SCN7AQ01118 1682 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 A0A087X0B3 334 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 PATL2C9JE40 543 aaKnown RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 IKBKBO14920 756 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ADAMTS3O15072 1205 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ZBTB43O43298 467 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 GDF9O60383 454 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 PPP6R2O75170 966 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ZPR1O75312 459 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 FMNL1O95466 1100 aaPredicted RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 AVPP01185 164 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 SYKP43405 635 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 SMCPP49901 116 aaPredicted RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 EIF5P55010 431 aaKnown RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 FMR1Q06787 632 aaKnown RBP eCLIP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ITPK1Q13572 414 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 SYCP1Q15431 976 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 PTPN14Q15678 1187 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ELF2Q15723 593 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ZNF827Q17R98 1081 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 LRRFIP1Q32MZ4 808 aaKnown RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 KMT5BQ4FZB7 885 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 HSP90AA4PQ58FG1 418 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 SYNE3Q6ZMZ3 975 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 GRAMD1CQ8IYS0 662 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 MIGA1Q8NAN2 632 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 CCDC112Q8NEF3 446 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 PKNOX2Q96KN3 472 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 TIGD1Q96MW7 591 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 SLC26A6Q9BXS9 759 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 TEX13AQ9BXU3 409 aaPredicted RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ZNF446Q9NWS9 450 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 FBXO2Q9UK22 296 aaPredicted RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 PCDHB6Q9Y5E3 794 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 PCDHA5Q9Y5H7 936 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 KAT6BQ8WYB5 2073 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 ROBO1Q9Y6N7 1651 aa4.98□□□□□ -1.61
SEC22B-202ENST00000618538 COL14A1Q05707 1796 aaKnown RBP4.98□□□□□ -1.61
SEC22B-202ENST00000618538 CYP2D7A0A087X1C5 515 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 ERVV-1B6SEH8 477 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NEMFO60524 1076 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 CAMTA2O94983 1202 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NTSR2O95665 410 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 MMP1P03956 469 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IFNAR1P17181 557 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IL6STP40189 918 aaPredicted RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IARSP41252 1262 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 LIFRP42702 1097 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 DMTNQ08495 405 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 FUT2Q10981 343 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NFX1Q12986 1120 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 TRDNQ13061 729 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 TTF1Q15361 905 aaPredicted RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 CCDC93Q567U6 631 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 AKNAD1Q5T1N1 836 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 FBXO38Q6PIJ6 1188 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 TRIM65Q6PJ69 517 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 KRBA2Q6ZNG9 492 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 SLC51AQ86UW1 340 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NOSTRINQ8IVI9 506 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 DIS3L2Q8IYB7 885 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 CCDC82Q8N4S0 544 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 AIDAQ96BJ3 306 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 TMEM87BQ96K49 555 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 NAT10Q9H0A0 1025 aaKnown RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 TMX1Q9H3N1 280 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 L2HGDHQ9H9P8 463 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 FANCLQ9NW38 375 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IMPACTQ9P2X3 320 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 IQSEC3Q9UPP2 1182 aaPredicted RBP4.97□□□□□ -1.61
SEC22B-202ENST00000618538 PAXBP1Q9Y5B6 917 aa4.97□□□□□ -1.61
SEC22B-202ENST00000618538 STK36Q9NRP7 1315 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms