RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 GNAT1P11488 350 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 MRPL12P52815 198 aaKnown RBP13.71□□□□□ -0.21
MATR3-227ENST00000618441 HHATQ5VTY9 493 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 GRAMD1CQ8IYS0 662 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 TATDN2Q93075 761 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 CCDC43Q96MW1 224 aaKnown RBP13.71□□□□□ -0.21
MATR3-227ENST00000618441 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 GOLGA8KD6RF30 607 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 ANXA1P04083 346 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 TMEM139Q8IV31 216 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 TRIM4Q9C037 500 aa13.71□□□□□ -0.21
MATR3-227ENST00000618441 PDHA1P08559 390 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 CNGA1P29973 690 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 CXCR5P32302 372 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 PDE4BQ07343 736 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 PPP1R12CQ9BZL4 782 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 VPS16Q9H269 839 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
MATR3-227ENST00000618441 CCDC102BQ68D86 513 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 TTC30BQ8N4P2 665 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 KCNG4Q8TDN1 519 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 NOD2Q9HC29 1040 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 SMARCAL1Q9NZC9 954 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 TRPC6Q9Y210 931 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 AGPSO00116 658 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 HLTFQ14527 1009 aaKnown RBP eCLIP13.7□□□□□ -0.22
MATR3-227ENST00000618441 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
MATR3-227ENST00000618441 INTS13Q9NVM9 706 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 GGT7Q9UJ14 662 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 RPS6KL1Q9Y6S9 549 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 N4BP3O15049 544 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 ANP32DO95626 131 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 ATP1A1P05023 1023 aaKnown RBP13.7□□□□□ -0.22
MATR3-227ENST00000618441 IDEP14735 1019 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
MATR3-227ENST00000618441 JAKMIP2Q96AA8 810 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
MATR3-227ENST00000618441 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
MATR3-227ENST00000618441 hCG_2014768A0A024R1R8 64 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 CHGBP05060 677 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 AFMP43652 599 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 EHBP1Q8NDI1 1231 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 ADCY9O60503 1353 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 IKBKBO14920 756 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 RTN2O75298 545 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 PCK1P35558 622 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 TSGA10Q9BZW7 698 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 ATP6V0A4Q9HBG4 840 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 NR1D1P20393 614 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 LRRC23Q53EV4 343 aaPredicted RBP13.69□□□□□ -0.22
MATR3-227ENST00000618441 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 HDAC7Q8WUI4 952 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 VIPAS39Q9H9C1 493 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 SALL3Q9BXA9 1300 aa13.69□□□□□ -0.22
MATR3-227ENST00000618441 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 SCNN1BP51168 640 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 BZW1Q7L1Q6 419 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 KDM5AP29375 1690 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 GRIN2DO15399 1336 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 ADD1P35611 737 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 AARSP49588 968 aaKnown RBP eCLIP13.68□□□□□ -0.22
MATR3-227ENST00000618441 CCNI2Q6ZMN8 369 aaPredicted RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 CCDC63Q8NA47 563 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 CHCHD3Q9NX63 227 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 CDC27P30260 824 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 KIF5BP33176 963 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 KRT9P35527 623 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 TUBB4BP68371 445 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 CACNA2D3Q8IZS8 1091 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 SYCP3Q8IZU3 236 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 MYCBPAPQ8TBZ2 947 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 LRRC59Q96AG4 307 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 PAPOLBQ9NRJ5 636 aaKnown RBP13.68□□□□□ -0.22
MATR3-227ENST00000618441 ABCF2Q9UG63 623 aa13.68□□□□□ -0.22
MATR3-227ENST00000618441 PPP1R37O75864 691 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 TMOD1P28289 359 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 PDCD2Q16342 344 aaPredicted RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 WLSQ5T9L3 541 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 TRIM58Q8NG06 486 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 EPN3Q9H201 632 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 ZNF330Q9Y3S2 320 aaPredicted RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 RAB27AP51159 221 aa13.67□□□□□ -0.22
MATR3-227ENST00000618441 FMR1Q06787 632 aaKnown RBP eCLIP13.67□□□□□ -0.22
MATR3-227ENST00000618441 CKAP4Q07065 602 aaKnown RBP13.67□□□□□ -0.22
MATR3-227ENST00000618441 G3BP1Q13283 466 aaKnown RBP eCLIP13.67□□□□□ -0.224e-8■■□□□ 12.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms