RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 DCAF15Q66K64 600 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 RCSD1Q6JBY9 416 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 DLK2Q6UY11 383 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 KRT26Q7Z3Y9 468 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 SGMS1Q86VZ5 419 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 DGKHQ86XP1 1220 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 TMTC2Q8N394 836 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 ZNF526Q8TF50 670 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-219ENST00000617757 ANKS1AQ92625 1134 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 ZNF274Q96GC6 653 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-219ENST00000617757 TMX3Q96JJ7 454 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 NMRK2Q9NPI5 230 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 SH2B1Q9NRF2 756 aaPredicted RBP9.47□□□□□ -0.89
TARDBP-219ENST00000617757 BRPF3Q9ULD4 1205 aa9.47□□□□□ -0.89
TARDBP-219ENST00000617757 CCDC69A6NI79 296 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 PDIA3P30101 505 aaKnown RBP9.46□□□□□ -0.9
TARDBP-219ENST00000617757 GUCY1A2P33402 732 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 SLC4A3P48751 1232 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 SEPT2Q15019 361 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 SHROOM1Q2M3G4 852 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-219ENST00000617757 IFIT1BQ5T764 474 aaKnown RBP9.46□□□□□ -0.9
TARDBP-219ENST00000617757 NFXL1Q6ZNB6 911 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 TMEM179Q6ZVK1 233 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 CDCA5Q96FF9 252 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 CEP95Q96GE4 821 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 TMEM47Q9BQJ4 181 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 ZNF341Q9BYN7 854 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 GLIS2Q9BZE0 524 aaPredicted RBP9.46□□□□□ -0.9
TARDBP-219ENST00000617757 CABP5Q9NP86 173 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 MTMR4Q9NYA4 1195 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 ZNF112Q9UJU3 913 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 PTPRFP10586 1907 aa9.46□□□□□ -0.9
TARDBP-219ENST00000617757 ZBTB43O43298 467 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 CTNND1O60716 968 aaKnown RBP9.45□□□□□ -0.9
TARDBP-219ENST00000617757 PFKFB2O60825 505 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 USP2O75604 605 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-219ENST00000617757 GH2P01242 217 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 CAP2P40123 477 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 CCT2P78371 535 aaKnown RBP9.45□□□□□ -0.9
TARDBP-219ENST00000617757 ST3GAL1Q11201 340 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 STK3Q13188 491 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 CUL4AQ13619 759 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 MAP1SQ66K74 1059 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-219ENST00000617757 APOA5Q6Q788 366 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 POTEHQ6S545 545 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 LDHDQ86WU2 507 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 CLEC10AQ8IUN9 316 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 ZNF654Q8IZM8 581 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 NECAB1Q8N987 351 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 MKL1Q969V6 931 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 KANSL2Q9H9L4 492 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 NYAP2Q9P242 653 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 NAP1L2Q9ULW6 460 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-219ENST00000617757 STX8Q9UNK0 236 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 FZD1Q9UP38 647 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 NID2Q14112 1375 aa9.45□□□□□ -0.9
TARDBP-219ENST00000617757 TTLL1O95922 423 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 TOP1P11387 765 aaKnown RBP9.44□□□□□ -0.9
TARDBP-219ENST00000617757 EEF2P13639 858 aaKnown RBP9.44□□□□□ -0.9
TARDBP-219ENST00000617757 INPP5BP32019 993 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
TARDBP-219ENST00000617757 SCRN1Q12765 414 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 TROAPQ12815 778 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 PRKG1Q13976 671 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 RAB3GAP1Q15042 981 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 PPP4R3BQ5MIZ7 849 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 SYNE3Q6ZMZ3 975 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 RAB11FIP4Q86YS3 637 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 SIAH1Q8IUQ4 282 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 CCDC83Q8IWF9 413 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 GTF3C6Q969F1 213 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 KLRG1Q96E93 195 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 MYL10Q9BUA6 226 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 SLKQ9H2G2 1235 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-219ENST00000617757 KAT14Q9H8E8 782 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 GINM1Q9NU53 330 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 CLIP2Q9UDT6 1046 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 DAXXQ9UER7 740 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-219ENST00000617757 ZBTB21Q9ULJ3 1066 aa9.44□□□□□ -0.9
TARDBP-219ENST00000617757 PARP14Q460N5 1801 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 GOLGA8BA8MQT2 603 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 DDAH1O94760 285 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 ASNSP08243 561 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 CALM1P0DP23 149 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 CALM2P0DP24 149 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 CALM3P0DP25 149 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 RXRAP19793 462 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 NF2P35240 595 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 RCAN1P53805 252 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 ICA1Q05084 483 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 CATIPQ7Z7H3 387 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 MICU3Q86XE3 530 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 SPRYD3Q8NCJ5 442 aa9.43□□□□□ -0.9
TARDBP-219ENST00000617757 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.43□□□□□ -0.93e-13■□□□□ 8.3
TARDBP-219ENST00000617757 INTS4Q96HW7 963 aaKnown RBP9.43□□□□□ -0.9
TARDBP-219ENST00000617757 WRNIP1Q96S55 665 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms