RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TRPC3Q13507 836 aa11.4□□□□□ -0.59
CUL4A-212ENST00000617546 WHAMMQ8TF30 809 aa11.4□□□□□ -0.59
CUL4A-212ENST00000617546 C19orf44Q9H6X5 657 aa11.4□□□□□ -0.59
CUL4A-212ENST00000617546 VCX3AQ9NNX9 186 aa11.4□□□□□ -0.59
CUL4A-212ENST00000617546 FANCLQ9NW38 375 aa11.4□□□□□ -0.59
CUL4A-212ENST00000617546 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.59
CUL4A-212ENST00000617546 CETN3O15182 167 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 CEP104O60308 925 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 CCDC170Q8IYT3 715 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 FAM114A2Q9NRY5 505 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 SERTAD1Q9UHV2 236 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 HMGB1P1B2RPK0 211 aaPredicted RBP11.39□□□□□ -0.59
CUL4A-212ENST00000617546 RAPGEF3O95398 923 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 TNFAIP3P21580 790 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
CUL4A-212ENST00000617546 PRDM11Q9NQV5 511 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 THEGQ9P2T0 379 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 ZNF853P0CG23 659 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 TROVE2P10155 538 aaKnown RBP eCLIP11.39□□□□□ -0.59
CUL4A-212ENST00000617546 MUM1Q2TAK8 710 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 NOSTRINQ8IVI9 506 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 TUBB6Q9BUF5 446 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 AMOTL2Q9Y2J4 779 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 TRAF5O00463 557 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 SUN1O94901 812 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 CYP2E1P05181 493 aaPredicted RBP11.39□□□□□ -0.59
CUL4A-212ENST00000617546 MYL1P05976 194 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 EEF1GP26641 437 aaKnown RBP11.39□□□□□ -0.59
CUL4A-212ENST00000617546 DRP2Q13474 957 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 SEPT2Q15019 361 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 CHST3Q7LGC8 479 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 MSANTD4Q8NCY6 345 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 FAM184BQ9ULE4 1060 aa11.39□□□□□ -0.59
CUL4A-212ENST00000617546 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 NDUFA8P51970 172 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 ZNF174Q15697 407 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 MUM1L1Q5H9M0 696 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 WDR78Q5VTH9 848 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 CERS3Q8IU89 383 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 KRT25Q7Z3Z0 450 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 CUEDC2Q9H467 287 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 ZBTB3Q9H5J0 574 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 SUDS3Q9H7L9 328 aaPredicted RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 CASQ2O14958 399 aaPredicted RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 ARID5AQ03989 594 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 C11orf57Q6ZUT1 292 aaPredicted RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 PEX26Q7Z412 305 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 CCDC25Q86WR0 208 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 SLC35F6Q8N357 371 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 CRACR2BQ8N4Y2 399 aaPredicted RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 TRIM4Q9C037 500 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 Q9H521 79 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 NCOA5Q9HCD5 579 aaKnown RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 EIF3CLB5ME19 914 aaKnown RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 KLHL30Q0D2K2 578 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 BBOF1Q8ND07 529 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 EIF3CQ99613 913 aaKnown RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 TMOD2Q9NZR1 351 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 KDRP35968 1356 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 ERVK-7P63135 1459 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 EIF3BP55884 814 aaKnown RBP11.38□□□□□ -0.59
CUL4A-212ENST00000617546 KRT24Q2M2I5 525 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 HHATQ5VTY9 493 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 AMFRQ9UKV5 643 aa11.38□□□□□ -0.59
CUL4A-212ENST00000617546 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 PTH1RQ03431 593 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 VPS52Q8N1B4 723 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 GBP7Q8N8V2 638 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 ARHGEF2Q92974 986 aaKnown RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 BICD1Q96G01 975 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 TYW1Q9NV66 732 aaKnown RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 ARID4AP29374 1257 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 LGSNQ5TDP6 509 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 GRK7Q8WTQ7 553 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 ALDH8A1Q9H2A2 487 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 BZW2Q9Y6E2 419 aaKnown RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 FAM13AO94988 1023 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 HLA-DOAP06340 250 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 PAXIP1Q6ZW49 1069 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 PLBD2Q8NHP8 589 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 EYA1Q99502 592 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 FRMD4BQ9Y2L6 1034 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 PLCG2P16885 1265 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
CUL4A-212ENST00000617546 RESTQ13127 1097 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 GALNT17Q6IS24 598 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 KLHL7Q8IXQ5 586 aa11.37□□□□□ -0.59
CUL4A-212ENST00000617546 RNMTO43148 476 aaKnown RBP11.36□□□□□ -0.59
CUL4A-212ENST00000617546 STX2P32856 288 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 CWF19L2Q2TBE0 894 aaKnown RBP11.36□□□□□ -0.59
CUL4A-212ENST00000617546 SPZ1Q9BXG8 430 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 VIPAS39Q9H9C1 493 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 UHRF1BP1LA0JNW5 1464 aa11.36□□□□□ -0.59
CUL4A-212ENST00000617546 CCDC14Q49A88 953 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms