RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TAOK2Q9UL54 1235 aa26.84■■□□□ 1.89
NEDD4L-237ENST00000617539 SEPT2Q15019 361 aa26.83■■□□□ 1.89
NEDD4L-237ENST00000617539 UBE3CQ15386 1083 aa26.83■■□□□ 1.89
NEDD4L-237ENST00000617539 GPRC5AQ8NFJ5 357 aa26.83■■□□□ 1.89
NEDD4L-237ENST00000617539 NKX2-3Q8TAU0 364 aa26.83■■□□□ 1.89
NEDD4L-237ENST00000617539 ECHDC1Q9NTX5 307 aa26.83■■□□□ 1.89
NEDD4L-237ENST00000617539 PCDHB15Q9Y5E8 787 aa26.83■■□□□ 1.89
NEDD4L-237ENST00000617539 VCAM1P19320 739 aa26.82■■□□□ 1.88
NEDD4L-237ENST00000617539 Q3C1V9 767 aa26.82■■□□□ 1.88
NEDD4L-237ENST00000617539 TSHZ3Q63HK5 1081 aa26.82■■□□□ 1.88
NEDD4L-237ENST00000617539 U2AF1L4Q8WU68 220 aaKnown RBP26.82■■□□□ 1.88
NEDD4L-237ENST00000617539 DYNLL2Q96FJ2 89 aa26.82■■□□□ 1.88
NEDD4L-237ENST00000617539 CABP5Q9NP86 173 aa26.82■■□□□ 1.88
NEDD4L-237ENST00000617539 CYP2D7A0A087X1C5 515 aa26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 ERVK-9P63128 1117 aa26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 ERVK-24P63145 666 aa26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 PUS7LQ9H0K6 701 aaKnown RBP26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 PORCNQ9H237 461 aa26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 PAK6Q9NQU5 681 aaPredicted RBP26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 ATP8A2Q9NTI2 1148 aa26.81■■□□□ 1.88
NEDD4L-237ENST00000617539 RLFQ13129 1914 aa26.8■■□□□ 1.88
NEDD4L-237ENST00000617539 A0A1W2PRG0 241 aa26.8■■□□□ 1.88
NEDD4L-237ENST00000617539 USP14P54578 494 aa26.8■■□□□ 1.88
NEDD4L-237ENST00000617539 PAGR1Q9BTK6 254 aa26.8■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L15C9J2P7 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L13C9JLJ4 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L11C9JVI0 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L18D6R9N7 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L22D6RA61 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L17D6RBQ6 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L19D6RCP7 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L20D6RJB6 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 CNMDO75829 334 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 SGPL1O95470 568 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L24Q0WX57 530 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 TRIM32Q13049 653 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 CATSPERGQ6ZRH7 1159 aa26.79■■□□□ 1.88
NEDD4L-237ENST00000617539 MPHOSPH10O00566 681 aaKnown RBP26.78■■□□□ 1.88
NEDD4L-237ENST00000617539 RRP1P56182 461 aaKnown RBP26.78■■□□□ 1.88
NEDD4L-237ENST00000617539 C12orf60Q5U649 245 aa26.78■■□□□ 1.88
NEDD4L-237ENST00000617539 GTF3C2Q8WUA4 911 aaPredicted RBP26.78■■□□□ 1.88
NEDD4L-237ENST00000617539 SWAP70Q9UH65 585 aa26.78■■□□□ 1.88
NEDD4L-237ENST00000617539 CEP290O15078 2479 aa26.78■■□□□ 1.88
NEDD4L-237ENST00000617539 A0A0G2JMZ2 1700 aa26.77■■□□□ 1.88
NEDD4L-237ENST00000617539 HMGCRP04035 888 aa26.77■■□□□ 1.88
NEDD4L-237ENST00000617539 CLEC10AQ8IUN9 316 aa26.77■■□□□ 1.88
NEDD4L-237ENST00000617539 TRIB2Q92519 343 aa26.77■■□□□ 1.88
NEDD4L-237ENST00000617539 DEFB118Q96PH6 123 aa26.77■■□□□ 1.88
NEDD4L-237ENST00000617539 RPAP3Q9H6T3 665 aaPredicted RBP26.77■■□□□ 1.88
NEDD4L-237ENST00000617539 PARP14Q460N5 1801 aa26.76■■□□□ 1.88
NEDD4L-237ENST00000617539 USP17L12C9JPN9 530 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 USP17L21D6R901 530 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 AKR1B1P15121 316 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 MAPK4P31152 587 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 KIAA1755Q5JYT7 1200 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 ZSCAN25Q6NSZ9 544 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 TMEM179Q6ZVK1 233 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 SIAH1Q8IUQ4 282 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 KBTBD3Q8NAB2 608 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 USP6NLQ92738 828 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 RABGAP1Q9Y3P9 1069 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 SLC4A4Q9Y6R1 1079 aa26.76■■□□□ 1.87
NEDD4L-237ENST00000617539 LBX2Q6XYB7 198 aa26.75■■□□□ 1.87
NEDD4L-237ENST00000617539 GPR142Q7Z601 462 aa26.75■■□□□ 1.87
NEDD4L-237ENST00000617539 CRISPLD2Q9H0B8 497 aa26.75■■□□□ 1.87
NEDD4L-237ENST00000617539 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.75■■□□□ 1.872e-7■□□□□ 10.4
NEDD4L-237ENST00000617539 GREB1LQ9C091 1923 aaPredicted RBP26.75■■□□□ 1.87
NEDD4L-237ENST00000617539 SPDYE16A6NNV3 312 aaPredicted RBP26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 FARP2O94887 1054 aaPredicted RBP26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 CYP2B6P20813 491 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 CDK8P49336 464 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 MORN1Q5T089 497 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 CTR9Q6PD62 1173 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 C16orf86Q6ZW13 317 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 SOCS4Q8WXH5 440 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 GPATCH3Q96I76 525 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 STRBPQ96SI9 672 aaKnown RBP26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 NUDT12Q9BQG2 462 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 BTBD7Q9P203 1132 aa26.74■■□□□ 1.87
NEDD4L-237ENST00000617539 OTUD7AQ8TE49 926 aaPredicted RBP26.73■■□□□ 1.87
NEDD4L-237ENST00000617539 OSBP2Q969R2 916 aa26.73■■□□□ 1.87
NEDD4L-237ENST00000617539 ALPK3Q96L96 1907 aa26.73■■□□□ 1.87
NEDD4L-237ENST00000617539 H0YGN5 161 aa26.72■■□□□ 1.87
NEDD4L-237ENST00000617539 XRCC5P13010 732 aaKnown RBP26.72■■□□□ 1.87
NEDD4L-237ENST00000617539 MAP3K21Q5TCX8 1036 aa26.72■■□□□ 1.87
NEDD4L-237ENST00000617539 PLEKHH3Q7Z736 793 aa26.72■■□□□ 1.87
NEDD4L-237ENST00000617539 GCC1Q96CN9 775 aa26.72■■□□□ 1.87
NEDD4L-237ENST00000617539 PI4K2BQ8TCG2 481 aa26.71■■□□□ 1.87
NEDD4L-237ENST00000617539 RPTORQ8N122 1335 aa26.7■■□□□ 1.87
NEDD4L-237ENST00000617539 GSG1L2A8MUP6 293 aa26.7■■□□□ 1.86
NEDD4L-237ENST00000617539 TFRCP02786 760 aaKnown RBP26.7■■□□□ 1.86
NEDD4L-237ENST00000617539 ICA1Q05084 483 aa26.7■■□□□ 1.86
NEDD4L-237ENST00000617539 CCL14Q16627 93 aa26.7■■□□□ 1.86
NEDD4L-237ENST00000617539 APPBP2Q92624 585 aa26.7■■□□□ 1.86
NEDD4L-237ENST00000617539 RNF113AO15541 343 aaKnown RBP26.69■■□□□ 1.86
NEDD4L-237ENST00000617539 HABP4Q5JVS0 413 aaKnown RBP26.69■■□□□ 1.86
NEDD4L-237ENST00000617539 CCAR1Q8IX12 1150 aaKnown RBP26.69■■□□□ 1.86
NEDD4L-237ENST00000617539 DDRGK1Q96HY6 314 aa26.69■■□□□ 1.86
NEDD4L-237ENST00000617539 CCDC17Q96LX7 622 aa26.69■■□□□ 1.86
NEDD4L-237ENST00000617539 CRBNQ96SW2 442 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms