RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 CPA4Q9UI42 421 aa22.49■■□□□ 1.19
SUSD3-205ENST00000617293 SLC45A1Q9Y2W3 748 aa22.49■■□□□ 1.19
SUSD3-205ENST00000617293 CCDC171Q6TFL3 1326 aa22.49■■□□□ 1.19
SUSD3-205ENST00000617293 HSPD1P10809 573 aaKnown RBP22.48■■□□□ 1.19
SUSD3-205ENST00000617293 MFAP1P55081 439 aaKnown RBP22.48■■□□□ 1.19
SUSD3-205ENST00000617293 PPARAQ07869 468 aa22.48■■□□□ 1.19
SUSD3-205ENST00000617293 USP17L2Q6R6M4 530 aa22.48■■□□□ 1.19
SUSD3-205ENST00000617293 CTU1Q7Z7A3 348 aaKnown RBP22.48■■□□□ 1.19
SUSD3-205ENST00000617293 SLC3A2P08195 630 aaKnown RBP22.47■■□□□ 1.19
SUSD3-205ENST00000617293 PABPC4Q13310 644 aaKnown RBP eCLIP22.47■■□□□ 1.19
SUSD3-205ENST00000617293 SKAP1Q86WV1 359 aa22.47■■□□□ 1.19
SUSD3-205ENST00000617293 ERO1AQ96HE7 468 aa22.47■■□□□ 1.19
SUSD3-205ENST00000617293 ZNF287Q9HBT7 754 aa22.47■■□□□ 1.19
SUSD3-205ENST00000617293 EMILIN3Q9NT22 766 aa22.47■■□□□ 1.19
SUSD3-205ENST00000617293 ROBO3Q96MS0 1386 aa22.47■■□□□ 1.19
SUSD3-205ENST00000617293 LOC285556D6RIA3 1793 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 PRDM1O75626 825 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 RASA1P20936 1047 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 OSBPP22059 807 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 USP14P54578 494 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 ALX1Q15699 326 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 C17orf99Q6UX52 265 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 ZNF444Q8N0Y2 327 aaPredicted RBP22.46■■□□□ 1.19
SUSD3-205ENST00000617293 CD99L2Q8TCZ2 262 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 SMCR8Q8TEV9 937 aaPredicted RBP22.46■■□□□ 1.19
SUSD3-205ENST00000617293 PNMA3Q9UL41 463 aa22.46■■□□□ 1.19
SUSD3-205ENST00000617293 FGAP02671 866 aa22.45■■□□□ 1.18
SUSD3-205ENST00000617293 PDE4BQ07343 736 aa22.45■■□□□ 1.18
SUSD3-205ENST00000617293 CLEC10AQ8IUN9 316 aa22.45■■□□□ 1.18
SUSD3-205ENST00000617293 MCOLN1Q9GZU1 580 aa22.45■■□□□ 1.18
SUSD3-205ENST00000617293 KIAA1683Q9H0B3 1180 aa22.45■■□□□ 1.18
SUSD3-205ENST00000617293 A0A1W2PRG0 241 aa22.44■■□□□ 1.18
SUSD3-205ENST00000617293 ICA1Q05084 483 aa22.44■■□□□ 1.18
SUSD3-205ENST00000617293 CTDSPL2Q05D32 466 aa22.44■■□□□ 1.18
SUSD3-205ENST00000617293 ADGRA2Q96PE1 1338 aa22.44■■□□□ 1.18
SUSD3-205ENST00000617293 ECM2O94769 699 aaPredicted RBP22.43■■□□□ 1.18
SUSD3-205ENST00000617293 ATP2B2Q01814 1243 aa22.43■■□□□ 1.18
SUSD3-205ENST00000617293 SIAH1Q8IUQ4 282 aa22.43■■□□□ 1.18
SUSD3-205ENST00000617293 ASCC2Q9H1I8 757 aaPredicted RBP22.43■■□□□ 1.18
SUSD3-205ENST00000617293 KANSL2Q9H9L4 492 aa22.43■■□□□ 1.18
SUSD3-205ENST00000617293 ARHGEF10LQ9HCE6 1279 aa22.43■■□□□ 1.18
SUSD3-205ENST00000617293 TRIM17Q9Y577 477 aa22.43■■□□□ 1.18
SUSD3-205ENST00000617293 EEF2P13639 858 aaKnown RBP22.42■■□□□ 1.18
SUSD3-205ENST00000617293 HOXA7P31268 230 aaPredicted RBP22.42■■□□□ 1.18
SUSD3-205ENST00000617293 IRX3P78415 501 aaPredicted RBP22.42■■□□□ 1.18
SUSD3-205ENST00000617293 KIF22Q14807 665 aa22.42■■□□□ 1.18
SUSD3-205ENST00000617293 C12orf42Q96LP6 360 aa22.42■■□□□ 1.18
SUSD3-205ENST00000617293 BCRP11274 1271 aa22.41■■□□□ 1.18
SUSD3-205ENST00000617293 CHMLP26374 656 aa22.41■■□□□ 1.18
SUSD3-205ENST00000617293 LACTBP83111 547 aaPredicted RBP22.41■■□□□ 1.18
SUSD3-205ENST00000617293 CAP1Q01518 475 aa22.41■■□□□ 1.18
SUSD3-205ENST00000617293 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.41■■□□□ 1.18
SUSD3-205ENST00000617293 EFCC1Q9HA90 598 aa22.41■■□□□ 1.18
SUSD3-205ENST00000617293 INCENPQ9NQS7 918 aa22.41■■□□□ 1.18
SUSD3-205ENST00000617293 ANAPC4Q9UJX5 808 aa22.41■■□□□ 1.18
SUSD3-205ENST00000617293 HAND2P61296 217 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 ARHGEF6Q15052 776 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 PKN2Q16513 984 aaKnown RBP22.4■■□□□ 1.18
SUSD3-205ENST00000617293 FAM47AQ5JRC9 791 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 OTOP1Q7RTM1 612 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 ANKRD13CQ8N6S4 541 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 RUFY2Q8WXA3 655 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 P2RX7Q99572 595 aaKnown RBP22.4■■□□□ 1.18
SUSD3-205ENST00000617293 ARHGAP39Q9C0H5 1083 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 IL25Q9H293 177 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 SH2D4AQ9H788 454 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 TMX2Q9Y320 296 aa22.4■■□□□ 1.18
SUSD3-205ENST00000617293 USP17L15C9J2P7 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L13C9JLJ4 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L11C9JVI0 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L18D6R9N7 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L22D6RA61 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L17D6RBQ6 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L19D6RCP7 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L20D6RJB6 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 TSPY3P0CV98 308 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 TSPY8P0CW00 308 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 VCAM1P19320 739 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 TFAP4Q01664 338 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 USP17L24Q0WX57 530 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 ABHD8Q96I13 439 aa22.39■■□□□ 1.17
SUSD3-205ENST00000617293 ZMYM6O95789 1325 aa22.38■■□□□ 1.17
SUSD3-205ENST00000617293 GCLCP48506 637 aaPredicted RBP22.38■■□□□ 1.17
SUSD3-205ENST00000617293 ERICH6BQ5W0A0 696 aa22.38■■□□□ 1.17
SUSD3-205ENST00000617293 DSCC1Q9BVC3 393 aa22.38■■□□□ 1.17
SUSD3-205ENST00000617293 RPAP3Q9H6T3 665 aaPredicted RBP22.38■■□□□ 1.17
SUSD3-205ENST00000617293 TOMM22Q9NS69 142 aa22.38■■□□□ 1.17
SUSD3-205ENST00000617293 PPP4R2Q9NY27 417 aa22.38■■□□□ 1.17
SUSD3-205ENST00000617293 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.38■■□□□ 1.17
SUSD3-205ENST00000617293 TACC3Q9Y6A5 838 aa22.38■■□□□ 1.17
SUSD3-205ENST00000617293 ZNF213O14771 459 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 RAD21O60216 631 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 RANBP6O60518 1105 aaKnown RBP22.37■■□□□ 1.17
SUSD3-205ENST00000617293 PSMC4P43686 418 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 HERVK_113P62684 666 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 KIAA1755Q5JYT7 1200 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 CATSPERGQ6ZRH7 1159 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 SPICE1Q8N0Z3 855 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 NEDD1Q8NHV4 660 aa22.37■■□□□ 1.17
SUSD3-205ENST00000617293 VCPKMTQ9H867 229 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms