RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 PARP1P09874 1014 aaKnown RBP16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RILPL1Q5EBL4 403 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 ZNF34Q8IZ26 560 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 SYMPKQ92797 1274 aaKnown RBP16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 ZNF287Q9HBT7 754 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 UBR1Q8IWV7 1749 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RAD17O75943 681 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 PDIA4P13667 645 aaKnown RBP16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 TDRD12Q587J7 1177 aaKnown RBP16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 MMP10P09238 476 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 UBE4AQ14139 1066 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 TMOD2Q9NZR1 351 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 DACH1Q9UI36 760 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 UTYO14607 1347 aa16.82■□□□□ 0.28
TNFRSF11A-206ENST00000617039 KIAA1328Q86T90 577 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 DHX37Q8IY37 1157 aaKnown RBP16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 TRIM21P19474 475 aaKnown RBP16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 HSPA1LP34931 641 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 NEURL4Q96JN8 1562 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 U2AF2P26368 475 aaKnown RBP eCLIP16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RNASE9P60153 205 aaKnown RBP16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 NELFCDQ8IXH7 590 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
TNFRSF11A-206ENST00000617039 VEGFAP15692 232 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 MIGA2Q7L4E1 593 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 SMCO2A6NFE2 343 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 USP27XA6NNY8 438 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 TMEM232C9JQI7 657 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 SLC39A14Q15043 492 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 LRP10Q7Z4F1 713 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CAPZA3Q96KX2 299 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 HPS5Q9UPZ3 1129 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 NCOA3Q9Y6Q9 1424 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 ARHGAP23Q9P227 1491 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 PDE4DIPQ5VU43 2346 aa16.8■□□□□ 0.28
TNFRSF11A-206ENST00000617039 NTSR2O95665 410 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 UBXN1Q04323 297 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 GDAP1L1Q96MZ0 367 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 GUCA1BQ9UMX6 200 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 USP42Q9H9J4 1324 aaKnown RBP16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CHRNA5P30532 468 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 PLCD1P51178 756 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RTEL1Q9NZ71 1219 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CTR9Q6PD62 1173 aa16.79■□□□□ 0.28
TNFRSF11A-206ENST00000617039 TNNT3P45378 269 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 ZFYVE27Q5T4F4 411 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 GSTO1P78417 241 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 UBE2SQ16763 222 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CCDC84Q86UT8 332 aaPredicted RBP16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 PIGSQ96S52 555 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 USP32Q8NFA0 1604 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 YEATS4O95619 227 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CYP4A11Q02928 519 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 GRIK5Q16478 980 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CCDC174Q6PII3 467 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CACNA2D4Q7Z3S7 1137 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 HPS3Q969F9 1004 aa16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 ZNHIT6Q9NWK9 470 aaKnown RBP16.78■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RPS6KA4O75676 772 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 USP8P40818 1118 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 SLC1A4P43007 532 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 IQUBQ8NA54 791 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 RTL9Q8NET4 1388 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 LRRC41Q15345 812 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 KRBA2Q6ZNG9 492 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 IGDCC4Q8TDY8 1250 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CALML4Q96GE6 196 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 KANSL2Q9H9L4 492 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 EXOC1Q9NV70 894 aa16.77■□□□□ 0.28
TNFRSF11A-206ENST00000617039 UTRNP46939 3433 aa16.77■□□□□ 0.27
TNFRSF11A-206ENST00000617039 CFBP00751 764 aa16.77■□□□□ 0.27
TNFRSF11A-206ENST00000617039 SCG2P13521 617 aa16.77■□□□□ 0.27
TNFRSF11A-206ENST00000617039 SHC4Q6S5L8 630 aa16.77■□□□□ 0.27
TNFRSF11A-206ENST00000617039 OGFOD1Q8N543 542 aa16.77■□□□□ 0.27
TNFRSF11A-206ENST00000617039 NARFQ9UHQ1 456 aa16.77■□□□□ 0.27
TNFRSF11A-206ENST00000617039 CMA1P23946 247 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 NLRP12P59046 1061 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 GPSM2P81274 684 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 PDE4DQ08499 809 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 CCDC40Q4G0X9 1142 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 IGSF22Q8N9C0 903 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 CENPHQ9H3R5 247 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 C3P01024 1663 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 CUTAO60888 179 aa16.76■□□□□ 0.27
TNFRSF11A-206ENST00000617039 PHACTR2O75167 634 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms