RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 FASNP49327 2511 aaKnown RBP-0.66□□□□□ -2.52
SOX2-OT-236ENST00000616401 PKHD1P08F94 4074 aa-0.66□□□□□ -2.52
SOX2-OT-236ENST00000616401 NIPBLQ6KC79 2804 aaeCLIP-0.66□□□□□ -2.52
SOX2-OT-236ENST00000616401 PTPN13Q12923 2485 aa-0.66□□□□□ -2.52
SOX2-OT-236ENST00000616401 COL5A3P25940 1745 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 A0A087WYN8 130 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 A0A0J9YXV3 536 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 TEX51A0A1B0GUA7 166 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 WIPF3A6NGB9 483 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 WDR64B1ANS9 1081 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KLLNB2CW77 178 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KIR2DS3K7RE56 304 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SOCS5O75159 536 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF324O75467 553 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SRSF10O75494 262 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 C1RP00736 705 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 IGKV1D-16P01601 117 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 HGFP14210 728 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 EPHB2P29323 1055 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ERFP50548 548 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF134P52741 427 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 CRISP1P54107 249 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SLURP1P55000 103 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 WDR4P57081 412 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 TRIM32Q13049 653 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 DSC3Q14574 896 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SSPNQ14714 243 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KIR2DS3Q14952 304 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF239Q16600 458 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 DBN1Q16643 649 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF776Q68DI1 518 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 AWAT2Q6E213 333 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 LCN10Q6JVE6 187 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZSCAN25Q6NSZ9 544 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF746Q6NUN9 644 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ADAM5Q6NVV9 412 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KDM7AQ6ZMT4 941 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 PAXIP1Q6ZW49 1069 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 B4GALNT4Q76KP1 1039 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF627Q7L945 461 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 RD3Q7Z3Z2 195 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 PABPN1Q86U42 306 aaKnown RBP eCLIP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 FMR1NBQ8N0W7 255 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 DTWD1Q8N5C7 304 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 NKAPQ8N5F7 415 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 Q8N7P7 452 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ACBD4Q8NC06 268 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 TMEM52Q8NDY8 209 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SEMA6DQ8NFY4 1073 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ADAMTS16Q8TE57 1224 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 AENQ8WTP8 325 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 PHF10Q8WUB8 498 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 HERVK_113Q902F9 699 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 TNFRSF25Q93038 417 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 DNAJA3Q96EY1 480 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KIRREL1Q96J84 757 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 LYZL4Q96KX0 146 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SIGLEC10Q96LC7 697 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF347Q96SE7 839 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 EGFL8Q99944 293 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 GLIS2Q9BZE0 524 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 UNKQ9C0B0 810 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 LNPKQ9C0E8 428 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 RBSNQ9H1K0 784 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 EBF3Q9H4W6 596 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SYNPO2LQ9H987 977 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 PTPRHQ9HD43 1115 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 GCM1Q9NP62 436 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 CYLDQ9NQC7 956 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 PRDM9Q9NQV7 894 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 STRN4Q9NRL3 753 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KRT82Q9NSB4 513 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ATG3Q9NT62 314 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZCCHC3Q9NUD5 404 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 USP40Q9NVE5 1235 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 KIAA1468Q9P260 1216 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 SEPT9Q9UHD8 586 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 ST6GALNAC2Q9UJ37 374 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 UTS2RQ9UKP6 389 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 CTNND2Q9UQB3 1225 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 MMACHCQ9Y4U1 282 aa-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 COL11A2P13942 1736 aaPredicted RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 PLECQ15149 4684 aaKnown RBP-0.67□□□□□ -2.52
SOX2-OT-236ENST00000616401 COL12A1Q99715 3063 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 ARHGEF17Q96PE2 2063 aaPredicted RBP-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 ASXL3Q9C0F0 2248 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 MAP1AP78559 2803 aaPredicted RBP-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 ALMS1Q8TCU4 4167 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 IGKV1D-43A0A0B4J1Z2 117 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 A0A1W2PQM1 296 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 FIGNL2A6NMB9 653 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 ZNF814B7Z6K7 855 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 HNRNPDLO14979 420 aaKnown RBP-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 CYP26A1O43174 497 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 SPINT1O43278 529 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 GRID2O43424 1007 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 TLL1O43897 1013 aa-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 PPP1R15AO75807 674 aaPredicted RBP-0.68□□□□□ -2.52
SOX2-OT-236ENST00000616401 DKK1O94907 266 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms