RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 NOL10Q9BSC4 688 aaKnown RBP12.8□□□□□ -0.36
COL4A1-205ENST00000615732 CRISPLD2Q9H0B8 497 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 PIH1D3Q9NQM4 214 aaKnown RBP12.8□□□□□ -0.36
COL4A1-205ENST00000615732 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
COL4A1-205ENST00000615732 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 SIPA1L1O43166 1804 aa12.8□□□□□ -0.36
COL4A1-205ENST00000615732 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 A0A1W2PPC1 479 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 GDF11O95390 407 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 CYP2E1P05181 493 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-205ENST00000615732 ZAP70P43403 619 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 JAG1P78504 1218 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 FAM110CQ1W6H9 321 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 PROCA1Q8NCQ7 364 aaPredicted RBP12.79□□□□□ -0.36
COL4A1-205ENST00000615732 COA7Q96BR5 231 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 LRCH3Q96II8 777 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
COL4A1-205ENST00000615732 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL4A1-205ENST00000615732 NDUFB9Q9Y6M9 179 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 DOCK3Q8IZD9 2030 aa12.79□□□□□ -0.36
COL4A1-205ENST00000615732 DDX60LQ5H9U9 1706 aaKnown RBP12.79□□□□□ -0.36
COL4A1-205ENST00000615732 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
COL4A1-205ENST00000615732 HSP90AA1P07900 732 aaKnown RBP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 ANAPC15P60006 121 aa12.78□□□□□ -0.36
COL4A1-205ENST00000615732 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 NMIQ13287 307 aaPredicted RBP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 ASCC2Q9H1I8 757 aaPredicted RBP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
COL4A1-205ENST00000615732 PALD1Q9ULE6 856 aa12.78□□□□□ -0.36
COL4A1-205ENST00000615732 K7ELQ4 463 aaPredicted RBP12.77□□□□□ -0.37
COL4A1-205ENST00000615732 BAG3O95817 575 aa12.77□□□□□ -0.37
COL4A1-205ENST00000615732 TRIM32Q13049 653 aa12.77□□□□□ -0.37
COL4A1-205ENST00000615732 LRRFIP1Q32MZ4 808 aaKnown RBP12.77□□□□□ -0.37
COL4A1-205ENST00000615732 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.37
COL4A1-205ENST00000615732 MIGA1Q8NAN2 632 aa12.77□□□□□ -0.37
COL4A1-205ENST00000615732 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
COL4A1-205ENST00000615732 LSG1Q9H089 658 aaKnown RBP12.77□□□□□ -0.37
COL4A1-205ENST00000615732 PAG1Q9NWQ8 432 aa12.77□□□□□ -0.37
COL4A1-205ENST00000615732 PI4KBQ9UBF8 816 aa12.77□□□□□ -0.37
COL4A1-205ENST00000615732 GOLIM4O00461 696 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 IDH1O75874 414 aaKnown RBP12.76□□□□□ -0.37
COL4A1-205ENST00000615732 HMGCRP04035 888 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 PLCG2P16885 1265 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 CAPN2P17655 700 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 HSPA4P34932 840 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 IRX3P78415 501 aaPredicted RBP12.76□□□□□ -0.37
COL4A1-205ENST00000615732 NECAB2Q7Z6G3 386 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 C7orf61Q8IZ16 206 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 EDC3Q96F86 508 aaKnown RBP12.76□□□□□ -0.37
COL4A1-205ENST00000615732 IL25Q9H293 177 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 AS3MTQ9HBK9 375 aa12.76□□□□□ -0.37
COL4A1-205ENST00000615732 CYP7A1P22680 504 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 GCLCP48506 637 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-205ENST00000615732 MNX1P50219 401 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-205ENST00000615732 BACE1P56817 501 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
COL4A1-205ENST00000615732 ZYXQ15942 572 aaKnown RBP12.75□□□□□ -0.37
COL4A1-205ENST00000615732 SH3D19Q5HYK7 790 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 CCDC171Q6TFL3 1326 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 KBTBD3Q8NAB2 608 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 SLC17A8Q8NDX2 589 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 TRIB2Q92519 343 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 FAM227BQ96M60 508 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 GDF15Q99988 308 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 DHX36Q9H2U1 1008 aaKnown RBP12.75□□□□□ -0.37
COL4A1-205ENST00000615732 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 TMOD4Q9NZQ9 345 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 GJD2Q9UKL4 321 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 ZBTB21Q9ULJ3 1066 aa12.75□□□□□ -0.37
COL4A1-205ENST00000615732 ZMYND8Q9ULU4 1186 aaPredicted RBP12.75□□□□□ -0.37
COL4A1-205ENST00000615732 A0A0D9SFI3 127 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 ASNSP08243 561 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 MCM2P49736 904 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 PPP4CP60510 307 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 NBR1Q14596 966 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 TICAM2Q86XR7 235 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 IL27Q8NEV9 243 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
COL4A1-205ENST00000615732 WDR18Q9BV38 432 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 ANTXR1Q9H6X2 564 aa12.74□□□□□ -0.37
COL4A1-205ENST00000615732 A0A0C4DFX4 3053 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 RPTORQ8N122 1335 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 DLL1O00548 723 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 GH2P01242 217 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 HLA-DOAP06340 250 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 CYP2B6P20813 491 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 USP5P45974 858 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 HERVK_113P62684 666 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 PAGR1Q9BTK6 254 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
COL4A1-205ENST00000615732 MORF4L1Q9UBU8 362 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 FOCADQ5VW36 1801 aa12.73□□□□□ -0.37
COL4A1-205ENST00000615732 MYO5AQ9Y4I1 1855 aaKnown RBP12.72□□□□□ -0.37
COL4A1-205ENST00000615732 USP17L10C9JJH3 530 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms