RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 OXR1Q8N573 874 aa4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 MBD1Q9UIS9 605 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 DCTN4Q9UJW0 460 aa4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 TPX2Q9ULW0 747 aaKnown RBP4.82□□□□□ -1.64
HMGB1P24-202ENST00000615653 FANCGO15287 622 aa4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 PDE6BP35913 854 aa4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 MAGEA10P43363 369 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 PRPF40BQ6NWY9 871 aaKnown RBP4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 KCT2Q8NC54 265 aa4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 TMC1Q8TDI8 760 aa4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 TRAIPQ9BWF2 469 aa4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 SLITRK6Q9H5Y7 841 aa4.81□□□□□ -1.64
HMGB1P24-202ENST00000615653 FITM1A5D6W6 292 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 GPR182O15218 404 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 ZGLP1P0C6A0 271 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 ADAM17P78536 824 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 SNX17Q15036 470 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 ZBTB37Q5TC79 503 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 LSRQ86X29 649 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 GPBAR1Q8TDU6 330 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 CACNA2D2Q9NY47 1150 aa4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 BIN2Q9UBW5 565 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P24-202ENST00000615653 TMEM238LA0A1B0GVL6 79 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 HRKO00198 91 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 EIF1AYO14602 144 aaKnown RBP4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 IRS4O14654 1257 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 ORC1Q13415 861 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 CDC37L1Q7L3B6 337 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 STK35Q8TDR2 534 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 MRIQ9BWK5 157 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 TRAK1Q9UPV9 953 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 CSADQ9Y600 493 aa4.79□□□□□ -1.64
HMGB1P24-202ENST00000615653 C1QTNF3-AMACRE9PGA6 284 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 N4BP3O15049 544 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 CBX7O95931 251 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 ARNTP27540 789 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 MAPK1P28482 360 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 EPHB3P54753 998 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 SRSF3P84103 164 aaKnown RBP4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 PPP2R3AQ06190 1150 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 TNK2Q07912 1038 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 USPL1Q5W0Q7 1092 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 CREG2Q8IUH2 290 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 TMEFF1Q8IYR6 380 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 TP53I13Q8NBR0 393 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 CCDC74AQ96AQ1 378 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 SHISA4Q96DD7 197 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 NIF3L1Q9GZT8 377 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 NPHS2Q9NP85 383 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 TMEM39AQ9NV64 488 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 IVNS1ABPQ9Y6Y0 642 aa4.78□□□□□ -1.64
HMGB1P24-202ENST00000615653 OR14I1A6ND48 311 aa4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 KIR3DL1P43629 444 aa4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 MAP1SQ66K74 1059 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 TMC7Q7Z402 723 aa4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 FAM129CQ86XR2 697 aa4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 SULF2Q8IWU5 870 aa4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 ZSCAN29Q8IWY8 852 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 COX4I2Q96KJ9 171 aa4.77□□□□□ -1.65
HMGB1P24-202ENST00000615653 TREHO43280 583 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 GADD45BO75293 160 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 SLPIP03973 132 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 ZNF252P-AS1Q0IIN9 211 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 GAB4Q2WGN9 574 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 ZNF746Q6NUN9 644 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 CNKSR3Q6P9H4 555 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 C12orf40Q86WS4 652 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 RIN3Q8TB24 985 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 PIWIL2Q8TC59 973 aaKnown RBP4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 FBF1Q8TES7 1133 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 MIPEPQ99797 713 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 CNTD2Q9H8S5 307 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 PICK1Q9NRD5 415 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 SIRT5Q9NXA8 310 aa4.76□□□□□ -1.65
HMGB1P24-202ENST00000615653 WASH4PA8MWX3 477 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 DCDC2CA8MYV0 355 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 XRCC5P13010 732 aaKnown RBP4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 DSC3Q14574 896 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 CRB2Q5IJ48 1285 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 SPPL2CQ8IUH8 684 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 MFSD2AQ8NA29 543 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 ZNF507Q8TCN5 953 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 DHX38Q92620 1227 aaKnown RBP4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 ASB16Q96NS5 453 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 EMILIN2Q9BXX0 1053 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 NLRP2Q9NX02 1062 aa4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 GPN3Q9UHW5 284 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P24-202ENST00000615653 PNMA6FA0A0J9YX94 578 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 CAP2P40123 477 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 PLCB3Q01970 1234 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 FMR1Q06787 632 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 SLBPQ14493 270 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 ENOX2Q16206 610 aaKnown RBP4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 PPP1R13LQ8WUF5 828 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 VWCEQ96DN2 955 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 ACSBG1Q96GR2 724 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 GPR160Q9UJ42 338 aa4.74□□□□□ -1.65
HMGB1P24-202ENST00000615653 RBAK-RBAKDNI3L0D1 243 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms