RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 KDM4AO75164 1064 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 PSMA5P28066 241 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 AK2P54819 239 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 VGLL4Q14135 290 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 RRP1BQ14684 758 aaKnown RBP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 FAM47AQ5JRC9 791 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 NOL8Q76FK4 1167 aaKnown RBP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 METTL16Q86W50 562 aaKnown RBP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 ZSCAN29Q8IWY8 852 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 ZNF296Q8WUU4 475 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 EHD4Q9H223 541 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 R3HDMLQ9H3Y0 253 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.49□□□□□ -0.89
PCDH9-205ENST00000614931 CSADQ9Y600 493 aa9.49□□□□□ -0.89
PCDH9-205ENST00000614931 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 CCDC85CA6NKD9 419 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 SH2B2O14492 632 aaPredicted RBP9.48□□□□□ -0.89
PCDH9-205ENST00000614931 NMT2O60551 498 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 JAG1P78504 1218 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 ST3GAL1Q11201 340 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 DCAF15Q66K64 600 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 Q6ZUG5 572 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 DHX32Q7L7V1 743 aaKnown RBP9.48□□□□□ -0.89
PCDH9-205ENST00000614931 CTU1Q7Z7A3 348 aaKnown RBP9.48□□□□□ -0.89
PCDH9-205ENST00000614931 RALYLQ86SE5 291 aaKnown RBP9.48□□□□□ -0.89
PCDH9-205ENST00000614931 TTC6Q86TZ1 520 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 SNX21Q969T3 373 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 PTPN18Q99952 460 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 ZKSCAN3Q9BRR0 538 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 AGXT2Q9BYV1 514 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 DHX36Q9H2U1 1008 aaKnown RBP9.48□□□□□ -0.89
PCDH9-205ENST00000614931 RNF41Q9H4P4 317 aaPredicted RBP9.48□□□□□ -0.89
PCDH9-205ENST00000614931 CNNM2Q9H8M5 875 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 TOMM22Q9NS69 142 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 ZSWIM5Q9P217 1185 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 SERPINB13Q9UIV8 391 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 ZNF112Q9UJU3 913 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 SNCAIPQ9Y6H5 919 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 WDR19Q8NEZ3 1342 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
PCDH9-205ENST00000614931 PTPRFP10586 1907 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 RANBP6O60518 1105 aaKnown RBP9.47□□□□□ -0.89
PCDH9-205ENST00000614931 HLA-DOAP06340 250 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 AKR1B1P15121 316 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 MCM5P33992 734 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
PCDH9-205ENST00000614931 SLC4A3P48751 1232 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 GTF2A2P52657 109 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 PDE4BQ07343 736 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 TRDNQ13061 729 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 SEC23AQ15436 765 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 OTUD7BQ6GQQ9 843 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 MIGA2Q7L4E1 593 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 ERO1BQ86YB8 467 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 IGDCC4Q8TDY8 1250 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 BRF1Q92994 677 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 ZKSCAN4Q969J2 545 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-205ENST00000614931 OTUD5Q96G74 571 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 WRNIP1Q96S55 665 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.47□□□□□ -0.89
PCDH9-205ENST00000614931 ZNF341Q9BYN7 854 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 KRT23Q9C075 422 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 ALDH8A1Q9H2A2 487 aaPredicted RBP9.47□□□□□ -0.89
PCDH9-205ENST00000614931 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
PCDH9-205ENST00000614931 IGKV6D-41A0A0C4DH26 115 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 FKTNO75072 461 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 GDF11O95390 407 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 SLC3A2P08195 630 aaKnown RBP9.46□□□□□ -0.9
PCDH9-205ENST00000614931 HMGB1P09429 215 aaKnown RBP9.46□□□□□ -0.9
PCDH9-205ENST00000614931 PCP11498 1178 aaKnown RBP9.46□□□□□ -0.9
PCDH9-205ENST00000614931 TFAP4Q01664 338 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 MAP3K10Q02779 954 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 APOBRQ0VD83 1088 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 PKN2Q16513 984 aaKnown RBP9.46□□□□□ -0.9
PCDH9-205ENST00000614931 RCSD1Q6JBY9 416 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 TATDN1Q6P1N9 297 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 CRACR2BQ8N4Y2 399 aaPredicted RBP9.46□□□□□ -0.9
PCDH9-205ENST00000614931 BRI3BPQ8WY22 251 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 ESR2Q92731 530 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 LY9Q9HBG7 655 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 MKNK2Q9HBH9 465 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 IL17RBQ9NRM6 502 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 SWAP70Q9UH65 585 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 BRPF3Q9ULD4 1205 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 TPCN1Q9ULQ1 816 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 TNKSO95271 1327 aa9.46□□□□□ -0.9
PCDH9-205ENST00000614931 CCL15-CCL14A0A0B4J2E2 113 aa9.45□□□□□ -0.9
PCDH9-205ENST00000614931 TSPY2A6NKD2 308 aa9.45□□□□□ -0.9
PCDH9-205ENST00000614931 PHF20L1A8MW92 1017 aa9.45□□□□□ -0.9
PCDH9-205ENST00000614931 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
PCDH9-205ENST00000614931 ST18O60284 1047 aa9.45□□□□□ -0.9
PCDH9-205ENST00000614931 DTNBO60941 627 aa9.45□□□□□ -0.9
PCDH9-205ENST00000614931 CETPP11597 493 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms