RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 FAM196BA6NMK8 535 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 RAB11FIP3O75154 756 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 BMP8BP34820 402 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 ERVK-9P63128 1117 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 ERVK-24P63145 666 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 ABCB5Q2M3G0 1257 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 CERKLQ49MI3 558 aaPredicted RBP8.77□□□□□ -1.01
TARDBP-216ENST00000614494 MAP3K21Q5TCX8 1036 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 MFSD14CQ5VZR4 134 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 CEP85Q6P2H3 762 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 PLEKHH3Q7Z736 793 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 LPAR1Q92633 364 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 C11orf49Q9H6J7 331 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 SNRKQ9NRH2 765 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 GJD2Q9UKL4 321 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 OGDHLQ9ULD0 1010 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 PALD1Q9ULE6 856 aa8.77□□□□□ -1.01
TARDBP-216ENST00000614494 CENPFP49454 3210 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 MAGEB6P1A0A0J9YX57 407 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 SLC15A5A6NIM6 579 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 STRNO43815 780 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 GH2P01242 217 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 IFIT2P09913 472 aaKnown RBP8.76□□□□□ -1.01
TARDBP-216ENST00000614494 ZSCAN25Q6NSZ9 544 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 MAMSTRQ6ZN01 415 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 AACSQ86V21 672 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 MAGEB6Q8N7X4 407 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 EAF2Q96CJ1 260 aaPredicted RBP8.76□□□□□ -1.01
TARDBP-216ENST00000614494 CCDC17Q96LX7 622 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 PRO3102Q9H379 93 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 DNAJC18Q9H819 358 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 HOXC10Q9NYD6 342 aa8.76□□□□□ -1.01
TARDBP-216ENST00000614494 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 GDF11O95390 407 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 POLR3DP05423 398 aaPredicted RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 HOXC6P09630 235 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 VCAM1P19320 739 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 COPB2P35606 906 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 MAP2K5Q13163 448 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 LRRFIP1Q32MZ4 808 aaKnown RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 SLC9C2Q5TAH2 1124 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 TMEM179Q6ZVK1 233 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 GPR142Q7Z601 462 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 ADGRA1Q86SQ6 560 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 ABRAQ8N0Z2 381 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 SHCBP1Q8NEM2 672 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 RHPN1Q8TCX5 695 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 TRIB2Q92519 343 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 PAWRQ96IZ0 340 aaKnown RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 P2RX7Q99572 595 aaKnown RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 ARHGEF10LQ9HCE6 1279 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 PIH1D3Q9NQM4 214 aaKnown RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 ATP8A2Q9NTI2 1148 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 RBM27Q9P2N5 1060 aaKnown RBP8.75□□□□□ -1.01
TARDBP-216ENST00000614494 TRIOBPQ9H2D6 2365 aa8.75□□□□□ -1.01
TARDBP-216ENST00000614494 MKI67P46013 3256 aaKnown RBP8.74□□□□□ -1.01
TARDBP-216ENST00000614494 RAB3GAP1Q15042 981 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 MORN1Q5T089 497 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 CATSPERGQ6ZRH7 1159 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 CCDC84Q86UT8 332 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-216ENST00000614494 MIGA1Q8NAN2 632 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 USP6NLQ92738 828 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 GPATCH3Q96I76 525 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 PAGR1Q9BTK6 254 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 CCDC8Q9H0W5 538 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-216ENST00000614494 MROH8Q9H579 483 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 ZNF287Q9HBT7 754 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 RBPJLQ9UBG7 517 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 SAP30BPQ9UHR5 308 aaKnown RBP8.74□□□□□ -1.01
TARDBP-216ENST00000614494 NRBP1Q9UHY1 535 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.74□□□□□ -1.01
TARDBP-216ENST00000614494 SIPA1L1O43166 1804 aa8.74□□□□□ -1.01
TARDBP-216ENST00000614494 DDX60LQ5H9U9 1706 aaKnown RBP8.74□□□□□ -1.01
TARDBP-216ENST00000614494 BRCA2P51587 3418 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 ZNF236Q9UL36 1845 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 PDE6AP16499 860 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 CYP2B6P20813 491 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 GRB14Q14449 540 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 RRP1BQ14684 758 aaKnown RBP8.73□□□□□ -1.01
TARDBP-216ENST00000614494 COG2Q14746 738 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 LRIT3Q3SXY7 679 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 OLFML2BQ68BL8 750 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 EDC3Q96F86 508 aaKnown RBP8.73□□□□□ -1.01
TARDBP-216ENST00000614494 RIOK1Q9BRS2 568 aaKnown RBP8.73□□□□□ -1.01
TARDBP-216ENST00000614494 MCM9Q9NXL9 1143 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 TLR7Q9NYK1 1049 aaKnown RBP8.73□□□□□ -1.01
TARDBP-216ENST00000614494 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.73□□□□□ -1.01
TARDBP-216ENST00000614494 SYNPO2Q9UMS6 1093 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 EXOC6BQ9Y2D4 811 aa8.73□□□□□ -1.01
TARDBP-216ENST00000614494 DNM1LO00429 736 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 SLC25A27O95847 323 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 COL6A1P12109 1028 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 ATP5JP18859 108 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 PTPREP23469 700 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 DYNLL1P63167 89 aaKnown RBP8.72□□□□□ -1.01
TARDBP-216ENST00000614494 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 GABPAQ06546 454 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 UBE3CQ15386 1083 aa8.72□□□□□ -1.01
TARDBP-216ENST00000614494 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms