RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 SGIP1Q9BQI5 828 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 ALDH8A1Q9H2A2 487 aaPredicted RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 TDRD3Q9H7E2 651 aaKnown RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 PSMD14O00487 310 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 WDHD1O75717 1129 aaPredicted RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 ZSCAN22P10073 491 aaPredicted RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 VEGFAP15692 232 aaPredicted RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 TPD52L1Q16890 204 aaPredicted RBP11.47□□□□□ -0.57
GGA3-221ENST00000614198 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 TRIM5Q9C035 493 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 IL17RBQ9NRM6 502 aa11.47□□□□□ -0.57
GGA3-221ENST00000614198 CLRN2A0PK11 232 aa11.46□□□□□ -0.57
GGA3-221ENST00000614198 CRKP46108 304 aa11.46□□□□□ -0.57
GGA3-221ENST00000614198 C12orf60Q5U649 245 aa11.46□□□□□ -0.57
GGA3-221ENST00000614198 PRMT6Q96LA8 375 aaPredicted RBP11.46□□□□□ -0.57
GGA3-221ENST00000614198 PIM2Q9P1W9 311 aa11.46□□□□□ -0.57
GGA3-221ENST00000614198 QSER1Q2KHR3 1735 aa11.46□□□□□ -0.57
GGA3-221ENST00000614198 POLD1P28340 1107 aa11.46□□□□□ -0.58
GGA3-221ENST00000614198 TFAP4Q01664 338 aa11.46□□□□□ -0.58
GGA3-221ENST00000614198 TICAM2Q86XR7 235 aa11.46□□□□□ -0.58
GGA3-221ENST00000614198 EYA3Q99504 573 aa11.46□□□□□ -0.58
GGA3-221ENST00000614198 BAG3O95817 575 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 METAP2P50579 478 aaKnown RBP eCLIP11.45□□□□□ -0.58
GGA3-221ENST00000614198 TEX2Q8IWB9 1127 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 KIAA1551Q9HCM1 1747 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 F13A1P00488 732 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 BRD2P25440 801 aaKnown RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 CYP2C19P33261 490 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 TNNT3P45378 269 aaPredicted RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 WTAPQ15007 396 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 PODNQ7Z5L7 613 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 CKAP2LQ8IYA6 745 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 ATP8A2Q9NTI2 1148 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 TSPY2A6NKD2 308 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 NFKBIEO00221 500 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 HMGB2P26583 209 aaKnown RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 CCDC186Q7Z3E2 898 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 NOL10Q9BSC4 688 aaKnown RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 UBAC1Q9BSL1 405 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 FEZ2Q9UHY8 353 aaPredicted RBP11.45□□□□□ -0.58
GGA3-221ENST00000614198 SLC12A7Q9Y666 1083 aa11.45□□□□□ -0.58
GGA3-221ENST00000614198 CCDC69A6NI79 296 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 PLEKHA8P1O95397 391 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 SEC23AQ15436 765 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 CCDC93Q567U6 631 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 CCDC125Q86Z20 511 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 ZNF274Q96GC6 653 aaPredicted RBP11.44□□□□□ -0.58
GGA3-221ENST00000614198 ZSCAN10Q96SZ4 725 aaPredicted RBP11.44□□□□□ -0.58
GGA3-221ENST00000614198 MKNK2Q9HBH9 465 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 DDTLA6NHG4 134 aaPredicted RBP11.44□□□□□ -0.58
GGA3-221ENST00000614198 ZBTB43O43298 467 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 GSTO1P78417 241 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
GGA3-221ENST00000614198 RGS22Q8NE09 1264 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 TBC1D22AQ8WUA7 517 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 KRT23Q9C075 422 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
GGA3-221ENST00000614198 GAKO14976 1311 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 BRCA2P51587 3418 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 GOLGA8AA7E2F4 631 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 CPLX1O14810 134 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 ADAMTS3O15072 1205 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 PPP4CP60510 307 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 LRMPQ12912 555 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 ESR2Q92731 530 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 ANAPC4Q9UJX5 808 aa11.44□□□□□ -0.58
GGA3-221ENST00000614198 ASTN2O75129 1339 aaPredicted RBP11.43□□□□□ -0.58
GGA3-221ENST00000614198 ZMYM6O95789 1325 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 CCDC192P0DO97 292 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 HNRNPH2P55795 449 aaKnown RBP11.43□□□□□ -0.58
GGA3-221ENST00000614198 RCSD1Q6JBY9 416 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 SH3BP5LQ7L8J4 393 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 TEKT1Q969V4 418 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 SHISA4Q96DD7 197 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 SLC26A6Q9BXS9 759 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 TMX1Q9H3N1 280 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 ORC3Q9UBD5 711 aaPredicted RBP11.43□□□□□ -0.58
GGA3-221ENST00000614198 STX8Q9UNK0 236 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 TCP10L2B9ZVM9 353 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 CDK8P49336 464 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 NTRK3Q16288 839 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 STRIP1Q5VSL9 837 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 ZNF654Q8IZM8 581 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 MYH1P12882 1939 aa11.43□□□□□ -0.58
GGA3-221ENST00000614198 KIF28PB7ZC32 967 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 H3BQV1 296 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 LDHCP07864 332 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 RASA1P20936 1047 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 EVCP57679 992 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 IFIT1BQ5T764 474 aaKnown RBP11.42□□□□□ -0.58
GGA3-221ENST00000614198 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 CEP135Q66GS9 1140 aa11.42□□□□□ -0.58
GGA3-221ENST00000614198 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms