RNA–Protein interactions for RNA: ENST00000614078.4

PCSK4-213, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 4

Gene PCSK4, Length 730 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-213ENST00000614078 SPP2Q13103 211 aa21.88■■□□□ 1.09
PCSK4-213ENST00000614078 PRRT2Q7Z6L0 340 aaPredicted RBP21.88■■□□□ 1.09
PCSK4-213ENST00000614078 BRI3BPQ8WY22 251 aa21.88■■□□□ 1.09
PCSK4-213ENST00000614078 USP17L10C9JJH3 530 aa21.87■■□□□ 1.09
PCSK4-213ENST00000614078 MPHOSPH10O00566 681 aaKnown RBP21.87■■□□□ 1.09
PCSK4-213ENST00000614078 PCP11498 1178 aaKnown RBP21.87■■□□□ 1.09
PCSK4-213ENST00000614078 EN2P19622 333 aaPredicted RBP21.87■■□□□ 1.09
PCSK4-213ENST00000614078 NT5C2P49902 561 aa21.87■■□□□ 1.09
PCSK4-213ENST00000614078 DOCK1Q14185 1865 aa21.87■■□□□ 1.09
PCSK4-213ENST00000614078 BAZ2AQ9UIF9 1905 aaKnown RBP21.86■■□□□ 1.09
PCSK4-213ENST00000614078 TRIM75PA6NK02 468 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 SGSM2O43147 1006 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 BACE1P56817 501 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 JAG1P78504 1218 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 EVX2Q03828 476 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 RAB3GAP1Q15042 981 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 SH3D19Q5HYK7 790 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 ANKRD23Q86SG2 305 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 PROCA1Q8NCQ7 364 aaPredicted RBP21.86■■□□□ 1.09
PCSK4-213ENST00000614078 SLC44A5Q8NCS7 719 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 PTPN22Q9Y2R2 807 aa21.86■■□□□ 1.09
PCSK4-213ENST00000614078 ZNF213O14771 459 aa21.85■■□□□ 1.09
PCSK4-213ENST00000614078 KIAA1211Q6ZU35 1233 aa21.85■■□□□ 1.09
PCSK4-213ENST00000614078 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
PCSK4-213ENST00000614078 KANSL2Q9H9L4 492 aa21.85■■□□□ 1.09
PCSK4-213ENST00000614078 SLC45A1Q9Y2W3 748 aa21.85■■□□□ 1.09
PCSK4-213ENST00000614078 MYCP01106 439 aaPredicted RBP21.84■■□□□ 1.09
PCSK4-213ENST00000614078 USP14P54578 494 aa21.84■■□□□ 1.09
PCSK4-213ENST00000614078 PABPC4Q13310 644 aaKnown RBP eCLIP21.84■■□□□ 1.09
PCSK4-213ENST00000614078 PPP4R3BQ5MIZ7 849 aa21.84■■□□□ 1.09
PCSK4-213ENST00000614078 RNF41Q9H4P4 317 aaPredicted RBP21.84■■□□□ 1.09
PCSK4-213ENST00000614078 TMOD4Q9NZQ9 345 aa21.84■■□□□ 1.09
PCSK4-213ENST00000614078 BTBD19C9JJ37 291 aa21.83■■□□□ 1.09
PCSK4-213ENST00000614078 FGRP09769 529 aa21.83■■□□□ 1.09
PCSK4-213ENST00000614078 RASA1P20936 1047 aa21.83■■□□□ 1.09
PCSK4-213ENST00000614078 SEPT2Q15019 361 aa21.83■■□□□ 1.09
PCSK4-213ENST00000614078 IMMTQ16891 758 aaKnown RBP21.83■■□□□ 1.09
PCSK4-213ENST00000614078 SH2D4AQ9H788 454 aa21.83■■□□□ 1.09
PCSK4-213ENST00000614078 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.83■■□□□ 1.09
PCSK4-213ENST00000614078 RBBP6Q7Z6E9 1792 aaKnown RBP21.82■■□□□ 1.08
PCSK4-213ENST00000614078 SMIM22K7EJ46 135 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 CDC45O75419 566 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 AKR1B1P15121 316 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 GUCY1A2P33402 732 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 MOGSQ13724 837 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 USP17L2Q6R6M4 530 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 CCDC84Q86UT8 332 aaPredicted RBP21.82■■□□□ 1.08
PCSK4-213ENST00000614078 KIAA1683Q9H0B3 1180 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 ZFYVE28Q9HCC9 887 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 ARHGEF10LQ9HCE6 1279 aa21.82■■□□□ 1.08
PCSK4-213ENST00000614078 CEP290O15078 2479 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 ORC4O43929 436 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 ECM2O94769 699 aaPredicted RBP21.81■■□□□ 1.08
PCSK4-213ENST00000614078 GADL1Q6ZQY3 521 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 STK11IPQ8N1F8 1099 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 FAM43AQ8N2R8 423 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 FEZ1Q99689 392 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 EFCC1Q9HA90 598 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 AGTPBP1Q9UPW5 1226 aa21.81■■□□□ 1.08
PCSK4-213ENST00000614078 U3KPZ7 1027 aaPredicted RBP21.81■■□□□ 1.08
PCSK4-213ENST00000614078 PDHXO00330 501 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 TSPY3P0CV98 308 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 TSPY8P0CW00 308 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 HMGCS2P54868 508 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 CTDSPL2Q05D32 466 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 MTMR2Q13614 643 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 TAF1CQ15572 869 aaPredicted RBP21.8■■□□□ 1.08
PCSK4-213ENST00000614078 SHROOM1Q2M3G4 852 aaPredicted RBP21.8■■□□□ 1.08
PCSK4-213ENST00000614078 HABP4Q5JVS0 413 aaKnown RBP21.8■■□□□ 1.08
PCSK4-213ENST00000614078 AKNAD1Q5T1N1 836 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 GPAT2Q6NUI2 795 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 MFSD6Q6ZSS7 791 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 ERO1AQ96HE7 468 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 ESYT1Q9BSJ8 1104 aa21.8■■□□□ 1.08
PCSK4-213ENST00000614078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.8■■□□□ 1.08
PCSK4-213ENST00000614078 ATAD5Q96QE3 1844 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 SP3Q02447 781 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 ICA1Q05084 483 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 NEDD1Q8NHV4 660 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 STAG1Q8WVM7 1258 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 C12orf42Q96LP6 360 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 PNMA3Q9UL41 463 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 SYNPO2Q9UMS6 1093 aa21.79■■□□□ 1.08
PCSK4-213ENST00000614078 PRDM1O75626 825 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 OSBPP22059 807 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 HOXA7P31268 230 aaPredicted RBP21.78■■□□□ 1.08
PCSK4-213ENST00000614078 TFAP4Q01664 338 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 PARK7Q99497 189 aaKnown RBP21.78■■□□□ 1.08
PCSK4-213ENST00000614078 ARHGAP39Q9C0H5 1083 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 IL25Q9H293 177 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 NYAP2Q9P242 653 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 TMX2Q9Y320 296 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 PHIPQ8WWQ0 1821 aa21.78■■□□□ 1.08
PCSK4-213ENST00000614078 TSPY2A6NKD2 308 aa21.77■■□□□ 1.08
PCSK4-213ENST00000614078 LPAR1Q92633 364 aa21.77■■□□□ 1.08
PCSK4-213ENST00000614078 ARMC5Q96C12 935 aa21.77■■□□□ 1.08
PCSK4-213ENST00000614078 PTCH2Q9Y6C5 1203 aa21.77■■□□□ 1.08
PCSK4-213ENST00000614078 RANBP6O60518 1105 aaKnown RBP21.76■■□□□ 1.07
PCSK4-213ENST00000614078 TLR2O60603 784 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms