RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 DEFB118Q96PH6 123 aa26.22■■□□□ 1.79
CBWD1-223ENST00000613988 HAUS7Q99871 368 aa26.22■■□□□ 1.79
CBWD1-223ENST00000613988 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.22■■□□□ 1.79
CBWD1-223ENST00000613988 NAV1Q8NEY1 1877 aa26.22■■□□□ 1.79
CBWD1-223ENST00000613988 CEP290O15078 2479 aa26.22■■□□□ 1.79
CBWD1-223ENST00000613988 TFRCP02786 760 aaKnown RBP26.21■■□□□ 1.79
CBWD1-223ENST00000613988 CCAR1Q8IX12 1150 aaKnown RBP26.21■■□□□ 1.79
CBWD1-223ENST00000613988 C12orf42Q96LP6 360 aa26.21■■□□□ 1.79
CBWD1-223ENST00000613988 ARMT1Q9H993 441 aa26.21■■□□□ 1.79
CBWD1-223ENST00000613988 DCP1AQ9NPI6 582 aaPredicted RBP26.21■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L15C9J2P7 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L13C9JLJ4 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L11C9JVI0 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L18D6R9N7 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L22D6RA61 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L17D6RBQ6 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L19D6RCP7 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L20D6RJB6 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 ADD2P35612 726 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 GABPAQ06546 454 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 USP17L24Q0WX57 530 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 HABP4Q5JVS0 413 aaKnown RBP26.2■■□□□ 1.79
CBWD1-223ENST00000613988 UBE2Q1Q7Z7E8 422 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 ACER1Q8TDN7 264 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 PAGR1Q9BTK6 254 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 KIAA1683Q9H0B3 1180 aa26.2■■□□□ 1.79
CBWD1-223ENST00000613988 PAK6Q9NQU5 681 aaPredicted RBP26.2■■□□□ 1.79
CBWD1-223ENST00000613988 H0YGN5 161 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 SMARCA5O60264 1052 aaPredicted RBP26.2■■□□□ 1.78
CBWD1-223ENST00000613988 FARP2O94887 1054 aaPredicted RBP26.2■■□□□ 1.78
CBWD1-223ENST00000613988 HMGCRP04035 888 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 CAPN2P17655 700 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 ERVK-9P63128 1117 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 ERVK-24P63145 666 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 Q3C1V9 767 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 SLFNL1Q499Z3 407 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 HTATIP2Q9BUP3 242 aa26.2■■□□□ 1.78
CBWD1-223ENST00000613988 DDX60LQ5H9U9 1706 aaKnown RBP26.2■■□□□ 1.78
CBWD1-223ENST00000613988 MPHOSPH10O00566 681 aaKnown RBP26.19■■□□□ 1.78
CBWD1-223ENST00000613988 MAPK4P31152 587 aa26.19■■□□□ 1.78
CBWD1-223ENST00000613988 EVX2Q03828 476 aa26.19■■□□□ 1.78
CBWD1-223ENST00000613988 NUDT12Q9BQG2 462 aa26.19■■□□□ 1.78
CBWD1-223ENST00000613988 MBD4O95243 580 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 IGHDP01880 384 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 CYP2D6P10635 497 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 CYP2B6P20813 491 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 GUCY1A2P33402 732 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 SEPT2Q15019 361 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 CATSPERGQ6ZRH7 1159 aa26.18■■□□□ 1.78
CBWD1-223ENST00000613988 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.18■■□□□ 1.78
CBWD1-223ENST00000613988 PRKAB2O43741 272 aa26.17■■□□□ 1.78
CBWD1-223ENST00000613988 VCAM1P19320 739 aa26.17■■□□□ 1.78
CBWD1-223ENST00000613988 SOCS4Q8WXH5 440 aa26.17■■□□□ 1.78
CBWD1-223ENST00000613988 ATP8A2Q9NTI2 1148 aa26.17■■□□□ 1.78
CBWD1-223ENST00000613988 PLXNB2O15031 1838 aa26.16■■□□□ 1.78
CBWD1-223ENST00000613988 UBE3CQ15386 1083 aa26.16■■□□□ 1.78
CBWD1-223ENST00000613988 POTEEQ6S8J3 1075 aa26.16■■□□□ 1.78
CBWD1-223ENST00000613988 PORCNQ9H237 461 aa26.16■■□□□ 1.78
CBWD1-223ENST00000613988 CWC22Q9HCG8 908 aaKnown RBP26.16■■□□□ 1.78
CBWD1-223ENST00000613988 SWAP70Q9UH65 585 aa26.16■■□□□ 1.78
CBWD1-223ENST00000613988 RABGAP1Q9Y3P9 1069 aa26.16■■□□□ 1.78
CBWD1-223ENST00000613988 RPTORQ8N122 1335 aa26.15■■□□□ 1.78
CBWD1-223ENST00000613988 TRIM32Q13049 653 aa26.15■■□□□ 1.78
CBWD1-223ENST00000613988 ZSCAN25Q6NSZ9 544 aa26.15■■□□□ 1.78
CBWD1-223ENST00000613988 TRIB2Q92519 343 aa26.15■■□□□ 1.78
CBWD1-223ENST00000613988 CRISPLD2Q9H0B8 497 aa26.15■■□□□ 1.78
CBWD1-223ENST00000613988 HMX1Q9NP08 348 aaPredicted RBP26.15■■□□□ 1.78
CBWD1-223ENST00000613988 COLQQ9Y215 455 aaPredicted RBP26.15■■□□□ 1.78
CBWD1-223ENST00000613988 CHGBP05060 677 aa26.14■■□□□ 1.78
CBWD1-223ENST00000613988 XRCC5P13010 732 aaKnown RBP26.14■■□□□ 1.78
CBWD1-223ENST00000613988 GPR142Q7Z601 462 aa26.14■■□□□ 1.78
CBWD1-223ENST00000613988 PLEKHH3Q7Z736 793 aa26.14■■□□□ 1.78
CBWD1-223ENST00000613988 SLC44A5Q8NCS7 719 aa26.14■■□□□ 1.78
CBWD1-223ENST00000613988 DYNLL2Q96FJ2 89 aa26.14■■□□□ 1.78
CBWD1-223ENST00000613988 RPAP3Q9H6T3 665 aaPredicted RBP26.14■■□□□ 1.78
CBWD1-223ENST00000613988 CCNA1P78396 465 aa26.13■■□□□ 1.77
CBWD1-223ENST00000613988 AMOTL1Q8IY63 956 aa26.13■■□□□ 1.77
CBWD1-223ENST00000613988 DDRGK1Q96HY6 314 aa26.13■■□□□ 1.77
CBWD1-223ENST00000613988 DCTPP1Q9H773 170 aa26.13■■□□□ 1.77
CBWD1-223ENST00000613988 ECHDC1Q9NTX5 307 aa26.13■■□□□ 1.77
CBWD1-223ENST00000613988 CNMDO75829 334 aa26.12■■□□□ 1.77
CBWD1-223ENST00000613988 TMEM179Q6ZVK1 233 aa26.12■■□□□ 1.77
CBWD1-223ENST00000613988 TRMT44Q8IYL2 757 aaKnown RBP26.12■■□□□ 1.77
CBWD1-223ENST00000613988 SLC4A4Q9Y6R1 1079 aa26.12■■□□□ 1.77
CBWD1-223ENST00000613988 MYH7P12883 1935 aa26.11■■□□□ 1.77
CBWD1-223ENST00000613988 A0A1W2PRG0 241 aa26.11■■□□□ 1.77
CBWD1-223ENST00000613988 RGS2P41220 211 aa26.11■■□□□ 1.77
CBWD1-223ENST00000613988 USP6NLQ92738 828 aa26.11■■□□□ 1.77
CBWD1-223ENST00000613988 NR2E3Q9Y5X4 410 aa26.11■■□□□ 1.77
CBWD1-223ENST00000613988 BAZ2AQ9UIF9 1905 aaKnown RBP26.11■■□□□ 1.77
CBWD1-223ENST00000613988 USP17L12C9JPN9 530 aa26.1■■□□□ 1.77
CBWD1-223ENST00000613988 USP17L21D6R901 530 aa26.1■■□□□ 1.77
CBWD1-223ENST00000613988 GLRX3O76003 335 aaKnown RBP26.1■■□□□ 1.77
CBWD1-223ENST00000613988 ZKSCAN1P17029 563 aaPredicted RBP26.1■■□□□ 1.77
CBWD1-223ENST00000613988 MORN1Q5T089 497 aa26.1■■□□□ 1.77
CBWD1-223ENST00000613988 C12orf60Q5U649 245 aa26.1■■□□□ 1.77
CBWD1-223ENST00000613988 LBX2Q6XYB7 198 aa26.1■■□□□ 1.77
CBWD1-223ENST00000613988 PAWRQ96IZ0 340 aaKnown RBP26.1■■□□□ 1.77
CBWD1-223ENST00000613988 PUS7LQ9H0K6 701 aaKnown RBP26.1■■□□□ 1.77
CBWD1-223ENST00000613988 CYP2D7A0A087X1C5 515 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms