RNA–Protein interactions for RNA: ENST00000613667.1

LINC00649-216, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 827 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-216ENST00000613667 EPS8L3Q8TE67 593 aaKnown RBP4.38□□□□□ -1.71
LINC00649-216ENST00000613667 SHISA4Q96DD7 197 aa4.38□□□□□ -1.71
LINC00649-216ENST00000613667 COX4I2Q96KJ9 171 aa4.38□□□□□ -1.71
LINC00649-216ENST00000613667 CBX8Q9HC52 389 aa4.38□□□□□ -1.71
LINC00649-216ENST00000613667 EBF1Q9UH73 591 aa4.38□□□□□ -1.71
LINC00649-216ENST00000613667 TRAK1Q9UPV9 953 aa4.38□□□□□ -1.71
LINC00649-216ENST00000613667 K7ESM1 405 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 MATN3O15232 486 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 PRICKLE3O43900 615 aaPredicted RBP4.37□□□□□ -1.71
LINC00649-216ENST00000613667 CILPO75339 1184 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 BMP6P22004 513 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 KIR3DL1P43629 444 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 SF3B2Q13435 895 aaKnown RBP4.37□□□□□ -1.71
LINC00649-216ENST00000613667 SNX17Q15036 470 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 GAB4Q2WGN9 574 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 LETMD1Q6P1Q0 360 aa4.37□□□□□ -1.71
LINC00649-216ENST00000613667 HRKO00198 91 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 EIF1AYO14602 144 aaKnown RBP4.36□□□□□ -1.71
LINC00649-216ENST00000613667 EFEMP2O95967 443 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 FSHBP01225 129 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 NEFLP07196 543 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 INPP5AQ14642 412 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 RTP5Q14D33 572 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 ZFYVE27Q5T4F4 411 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 PI16Q6UXB8 463 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 ZNF507Q8TCN5 953 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 Q96M66 194 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 EMILIN2Q9BXX0 1053 aa4.36□□□□□ -1.71
LINC00649-216ENST00000613667 DUSP15Q9H1R2 295 aaPredicted RBP4.36□□□□□ -1.71
LINC00649-216ENST00000613667 PAGE1O75459 146 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 ABL1P00519 1130 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 TPP2P29144 1249 aaPredicted RBP4.35□□□□□ -1.71
LINC00649-216ENST00000613667 MAGEA10P43363 369 aaPredicted RBP4.35□□□□□ -1.71
LINC00649-216ENST00000613667 PHLDB3Q6NSJ2 640 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 LRFN4Q6PJG9 635 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 MFSD2AQ8NA29 543 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 XAGE3Q8WTP9 111 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 PBXIP1Q96AQ6 731 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 FAM129BQ96TA1 746 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 SLITRK6Q9H5Y7 841 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 PCDHA4Q9UN74 947 aa4.35□□□□□ -1.71
LINC00649-216ENST00000613667 PRAMEF27A3QJZ7 478 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 OR14I1A6ND48 311 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 N4BP3O15049 544 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 TRIM37O94972 964 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 CYP7A1P22680 504 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 CAP2P40123 477 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 EGR3Q06889 387 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 PRAMEF13Q5VWM6 474 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 CDH24Q86UP0 819 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 SPPL2CQ8IUH8 684 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 TMEFF1Q8IYR6 380 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 LINC01356Q8N9X3 169 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 TP53I13Q8NBR0 393 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-216ENST00000613667 PIWIL2Q8TC59 973 aaKnown RBP4.34□□□□□ -1.71
LINC00649-216ENST00000613667 DHX38Q92620 1227 aaKnown RBP4.34□□□□□ -1.71
LINC00649-216ENST00000613667 ELMO3Q96BJ8 720 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 NECAB3Q96P71 396 aaPredicted RBP4.34□□□□□ -1.71
LINC00649-216ENST00000613667 CNTD2Q9H8S5 307 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 GPR160Q9UJ42 338 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 AKAP2Q9Y2D5 859 aa4.34□□□□□ -1.71
LINC00649-216ENST00000613667 TMEM88BA6NKF7 163 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 NOTOA8MTQ0 251 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 IRS4O14654 1257 aaPredicted RBP4.33□□□□□ -1.72
LINC00649-216ENST00000613667 GPR182O15218 404 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 SRSF3P84103 164 aaKnown RBP4.33□□□□□ -1.72
LINC00649-216ENST00000613667 CHRNEQ04844 493 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 PTPN11Q06124 597 aaPredicted RBP4.33□□□□□ -1.72
LINC00649-216ENST00000613667 PPP1R13LQ8WUF5 828 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 SIRT5Q9NXA8 310 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 BRPF3Q9ULD4 1205 aa4.33□□□□□ -1.72
LINC00649-216ENST00000613667 ENC1O14682 589 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 ADAM17P78536 824 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 CNKSR3Q6P9H4 555 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 SIRT2Q8IXJ6 389 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 MRIQ9BWK5 157 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 BCO2Q9BYV7 579 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 WNT10AQ9GZT5 417 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 NIF3L1Q9GZT8 377 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 PCDHA11Q9Y5I1 949 aa4.32□□□□□ -1.72
LINC00649-216ENST00000613667 C1QTNF3-AMACRE9PGA6 284 aa4.31□□□□□ -1.72
LINC00649-216ENST00000613667 CST3P01034 146 aaPredicted RBP4.31□□□□□ -1.72
LINC00649-216ENST00000613667 XRCC5P13010 732 aaKnown RBP4.31□□□□□ -1.72
LINC00649-216ENST00000613667 CDK8P49336 464 aa4.31□□□□□ -1.72
LINC00649-216ENST00000613667 ADGRF1Q5T601 910 aa4.31□□□□□ -1.72
LINC00649-216ENST00000613667 FAM129CQ86XR2 697 aa4.31□□□□□ -1.72
LINC00649-216ENST00000613667 C3orf58Q8NDZ4 430 aa4.31□□□□□ -1.72
LINC00649-216ENST00000613667 SYTL4Q96C24 671 aaPredicted RBP4.31□□□□□ -1.72
LINC00649-216ENST00000613667 PLPPR2Q96GM1 343 aa4.31□□□□□ -1.72
LINC00649-216ENST00000613667 TRIT1Q9H3H1 467 aaKnown RBP4.31□□□□□ -1.72
LINC00649-216ENST00000613667 VIPR1P32241 457 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 GDF5P43026 501 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 CDR1P51861 262 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 ARHGAP4P98171 946 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 UBXN11Q5T124 520 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 LLGL2Q6P1M3 1020 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 TPTE2Q6XPS3 522 aa4.3□□□□□ -1.72
LINC00649-216ENST00000613667 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.3□□□□□ -1.72
LINC00649-216ENST00000613667 NISCHQ9Y2I1 1504 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms