RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 KANSL2Q9H9L4 492 aa15.35■□□□□ 0.05
SRGAP2C-204ENST00000613462 TOMM22Q9NS69 142 aa15.35■□□□□ 0.05
SRGAP2C-204ENST00000613462 AFG3L2Q9Y4W6 797 aa15.35■□□□□ 0.05
SRGAP2C-204ENST00000613462 CASP8AP2Q9UKL3 1982 aa15.35■□□□□ 0.05
SRGAP2C-204ENST00000613462 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 IRF6O14896 467 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 RANBP6O60518 1105 aaKnown RBP15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 PRDM1O75626 825 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 CETPP11597 493 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 ICA1Q05084 483 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 NEDD1Q8NHV4 660 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 ARHGEF10LQ9HCE6 1279 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 NEDD4P46934 1319 aa15.34■□□□□ 0.05
SRGAP2C-204ENST00000613462 C19orf81C9J6K1 198 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 GJA5P36382 358 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 JAG1P78504 1218 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 TFAP4Q01664 338 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 SEPT2Q15019 361 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 CREB3L3Q68CJ9 461 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 SYNPO2Q9UMS6 1093 aa15.33■□□□□ 0.04
SRGAP2C-204ENST00000613462 PARP14Q460N5 1801 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 A0A0G2JLL6 359 aaPredicted RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 TESPA1A2RU30 521 aaPredicted RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 TRIM75PA6NK02 468 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 USP17L10C9JJH3 530 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 SLC27A2O14975 620 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 MCCP23508 829 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 USP14P54578 494 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 MKRN3Q13064 507 aaKnown RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 SPP2Q13103 211 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 KRT32Q14532 448 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 CCDC178Q5BJE1 867 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 FASTKD5Q7L8L6 764 aaKnown RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 PRRT2Q7Z6L0 340 aaPredicted RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 RALYLQ86SE5 291 aaKnown RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 IQCA1Q86XH1 822 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 NCOA7Q8NI08 942 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 MS4A4AQ96JQ5 239 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 FEZ1Q99689 392 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 TCP11L1Q9NUJ3 509 aa15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.32■□□□□ 0.04
SRGAP2C-204ENST00000613462 IGKV6D-41A0A0C4DH26 115 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 E7EWF7 191 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 AOC2O75106 756 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 HSPA4P34932 840 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 TM4SF4P48230 202 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 BACE1P56817 501 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 KIF23Q02241 960 aaPredicted RBP15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 TSGA10IPQ3SY00 556 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 SH3D19Q5HYK7 790 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 FAM47AQ5JRC9 791 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 OTUD7BQ6GQQ9 843 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 PROCA1Q8NCQ7 364 aaPredicted RBP15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 ZCCHC17Q9NP64 241 aaKnown RBP15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 MTMR4Q9NYA4 1195 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 NYAP2Q9P242 653 aa15.31■□□□□ 0.04
SRGAP2C-204ENST00000613462 CCL15-CCL14A0A0B4J2E2 113 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 B4E1Z4 1266 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 KDM4AO75164 1064 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 TTLL1O95922 423 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 MAP2K1Q02750 393 aaPredicted RBP15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 MTMR2Q13614 643 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 CCL15Q16663 113 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 USP17L2Q6R6M4 530 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 KCNB2Q92953 911 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 CEP95Q96GE4 821 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 INCENPQ9NQS7 918 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 TMOD4Q9NZQ9 345 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 TACC3Q9Y6A5 838 aa15.3■□□□□ 0.04
SRGAP2C-204ENST00000613462 ALDH1A1P00352 501 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 EEF2P13639 858 aaKnown RBP15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 SART3Q15020 963 aaKnown RBP15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 CCDC84Q86UT8 332 aaPredicted RBP15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 LPAR1Q92633 364 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 C12orf42Q96LP6 360 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 TTC14Q96N46 770 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 UBAC1Q9BSL1 405 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 GOPCQ9HD26 462 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 SLC45A1Q9Y2W3 748 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 TMX2Q9Y320 296 aa15.29■□□□□ 0.04
SRGAP2C-204ENST00000613462 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 NOVP48745 357 aa15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 HMGCS2P54868 508 aa15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 ANKRD23Q86SG2 305 aa15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 BRI3BPQ8WY22 251 aa15.28■□□□□ 0.04
SRGAP2C-204ENST00000613462 MKL1Q969V6 931 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms