RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 FMR1NBQ8N0W7 255 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-208ENST00000613073 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.87■□□□□ 0.61
CNOT3-208ENST00000613073 MCM9Q9NXL9 1143 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 ECM29Q5VYK3 1845 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 WDHD1O75717 1129 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-208ENST00000613073 SEC31AO94979 1220 aaKnown RBP18.87■□□□□ 0.61
CNOT3-208ENST00000613073 H2AFXP16104 143 aaPredicted RBP18.87■□□□□ 0.61
CNOT3-208ENST00000613073 KRBA2Q6ZNG9 492 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 IQCA1Q86XH1 822 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 SDF4Q9BRK5 362 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 RSPH14Q9UHP6 348 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 CCDC196A0A1B0GTZ2 297 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 USP17L8P0C7I0 530 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 DDR1Q08345 913 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 C10orf67Q8IYJ2 551 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 STK36Q9NRP7 1315 aa18.87■□□□□ 0.61
CNOT3-208ENST00000613073 UBR3Q6ZT12 1888 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 TRIM66O15016 1216 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 SLC27A3Q5K4L6 730 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 SPTY2D1Q68D10 685 aaPredicted RBP18.86■□□□□ 0.61
CNOT3-208ENST00000613073 PROM2Q8N271 834 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 ZNF804AQ7Z570 1209 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 WASF1Q92558 559 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 MTA3Q9BTC8 594 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 ATP8A2Q9NTI2 1148 aa18.86■□□□□ 0.61
CNOT3-208ENST00000613073 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 A0A1W2PQ27 194 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 A0A1W2PQ64 194 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 A0A1W2PQD8 194 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 SLC39A14Q15043 492 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 DIS3L2Q8IYB7 885 aaKnown RBP18.85■□□□□ 0.61
CNOT3-208ENST00000613073 WDR66Q8TBY9 1149 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 EPC1Q9H2F5 836 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 CTAGE5O15320 804 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 USP5P45974 858 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 IQCB1Q15051 598 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 CRY2Q49AN0 593 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 AXDND1Q5T1B0 1012 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-208ENST00000613073 CATIPQ7Z7H3 387 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 SH3RF3Q8TEJ3 882 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-208ENST00000613073 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
CNOT3-208ENST00000613073 PLEKHA8P1O95397 391 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 DEXIO95424 95 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 MMP1P03956 469 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 NR5A1Q13285 461 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 RBM17Q96I25 401 aaKnown RBP18.84■□□□□ 0.61
CNOT3-208ENST00000613073 NID2Q14112 1375 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 SAFBQ15424 915 aaKnown RBP eCLIP18.84■□□□□ 0.61
CNOT3-208ENST00000613073 CLIC6Q96NY7 704 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 LCMT1Q9UIC8 334 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
CNOT3-208ENST00000613073 BAZ2BQ9UIF8 2168 aaKnown RBP18.83■□□□□ 0.61
CNOT3-208ENST00000613073 MROH7-TTC4A0A0A0MT08 1334 aa18.83■□□□□ 0.61
CNOT3-208ENST00000613073 FGRP09769 529 aa18.83■□□□□ 0.61
CNOT3-208ENST00000613073 GYS2P54840 703 aa18.83■□□□□ 0.61
CNOT3-208ENST00000613073 NOSTRINQ8IVI9 506 aa18.83■□□□□ 0.61
CNOT3-208ENST00000613073 MAP3K14Q99558 947 aa18.83■□□□□ 0.61
CNOT3-208ENST00000613073 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.83■□□□□ 0.61
CNOT3-208ENST00000613073 PFKFB1P16118 471 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 ATP2B1P20020 1258 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 TEX35Q5T0J7 233 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 OXER1Q8TDS5 423 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 DYNLL2Q96FJ2 89 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 CD209Q9NNX6 404 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 ARPP21Q9UBL0 812 aaPredicted RBP18.83■□□□□ 0.6
CNOT3-208ENST00000613073 GGA1Q9UJY5 639 aa18.83■□□□□ 0.6
CNOT3-208ENST00000613073 TSPY2A6NKD2 308 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 POLRMTO00411 1230 aaKnown RBP18.82■□□□□ 0.6
CNOT3-208ENST00000613073 ZNF202O95125 648 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 CDC25BP30305 580 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 AKAP17AQ02040 695 aaKnown RBP18.82■□□□□ 0.6
CNOT3-208ENST00000613073 PTPAQ15257 358 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 TMCO3Q6UWJ1 677 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 CCDC34Q96HJ3 373 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 TSPYL1Q9H0U9 437 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 VPS54Q9P1Q0 977 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 V9GY48 417 aaPredicted RBP18.82■□□□□ 0.6
CNOT3-208ENST00000613073 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 TROAPQ12815 778 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 TGFBRAP1Q8WUH2 860 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 MRFAP1L1Q96HT8 127 aa18.82■□□□□ 0.6
CNOT3-208ENST00000613073 NEMFO60524 1076 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 SLC3A2P08195 630 aaKnown RBP18.81■□□□□ 0.6
CNOT3-208ENST00000613073 STX1AQ16623 288 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 HOMER1Q86YM7 354 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 POLLQ9UGP5 575 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 C6orf229H3BNL8 230 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 CMA1P23946 247 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 PDE4BQ07343 736 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 E4F1Q66K89 784 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-208ENST00000613073 RGS22Q8NE09 1264 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 SHISA4Q96DD7 197 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 ORC4O43929 436 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
CNOT3-208ENST00000613073 TOB1P50616 345 aaPredicted RBP18.81■□□□□ 0.6
CNOT3-208ENST00000613073 RCAN1P53805 252 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 SPECC1Q5M775 1068 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 PPP1R13BQ96KQ4 1090 aa18.81■□□□□ 0.6
CNOT3-208ENST00000613073 SAP30BPQ9UHR5 308 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms