RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 IL1RAPL2Q9NP60 686 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 FRMD4BQ9Y2L6 1034 aa9.67□□□□□ -0.86
TTC28-208ENST00000612946 TMCC1O94876 653 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 OGFOD1Q8N543 542 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 KLHL29Q96CT2 875 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 CRCPO75575 148 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 POLR3DP05423 398 aaPredicted RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 SERPINB6P35237 376 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 CCT2P78371 535 aaKnown RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 TEDDM1Q5T9Z0 273 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 ESR2Q92731 530 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 TTC4O95801 387 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 WTAPQ15007 396 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 PPP1R2P3Q6NXS1 205 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 OR8K1Q8NGG5 319 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 LRRC8CQ8TDW0 803 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 PDP2Q9P2J9 529 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 IKBKBO14920 756 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 THAP12O43422 761 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 KRT15P19012 456 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 TMTC3Q6ZXV5 915 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 E7ENQ6 273 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 KRR1Q13601 381 aaKnown RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 ANO1Q5XXA6 986 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 KIF2CQ99661 725 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 TMEM60Q9H2L4 133 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 NDUFA13Q9P0J0 144 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 GIPC1O14908 333 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 CYP2C19P33261 490 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 TTLL7Q6ZT98 887 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 CCDC13Q8IYE1 715 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 AK2P54819 239 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 CCDC89Q8N998 374 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 INTS9Q9NV88 658 aaKnown RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 SLC5A1P13866 664 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 GNA11P29992 359 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 IGHMBP2P38935 993 aaKnown RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 CYLC2Q14093 348 aaPredicted RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 ASIC2Q16515 512 aa9.66□□□□□ -0.86
TTC28-208ENST00000612946 ZC3H18Q86VM9 953 aaKnown RBP9.66□□□□□ -0.86
TTC28-208ENST00000612946 NCBP1Q09161 790 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 SFMBT2Q5VUG0 894 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 COPG1Q9Y678 874 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 APOEP02649 317 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 SLC26A6Q9BXS9 759 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 KLC4Q9NSK0 619 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 TUBA8Q9NY65 449 aaPredicted RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 KIF1BO60333 1816 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 CACNA1FO60840 1977 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 A0A1W2PQ27 194 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 A0A1W2PQ64 194 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 A0A1W2PQD8 194 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 PANX2Q96RD6 677 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 IL1RAPL1Q9NZN1 696 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 SPG7Q9UQ90 795 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 SPOPO43791 374 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 EEF2P13639 858 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 HOOK2Q96ED9 719 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 ZNF148Q9UQR1 794 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 MAPK13O15264 365 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 IFIT1P09914 478 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 ADCY2Q08462 1091 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 FBXO38Q6PIJ6 1188 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 NOC4LQ9BVI4 516 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 PARVBQ9HBI1 364 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 ASIC3Q9UHC3 531 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 FRMD3A2A2Y4 597 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 TMED10P49755 219 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 SFSWAPQ12872 951 aaKnown RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 MICU3Q86XE3 530 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 TBC1D8BQ0IIM8 1120 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.65□□□□□ -0.86
TTC28-208ENST00000612946 RIC8AQ9NPQ8 531 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 MRGBPQ9NV56 204 aa9.65□□□□□ -0.86
TTC28-208ENST00000612946 SPAG7O75391 227 aa9.65□□□□□ -0.87
TTC28-208ENST00000612946 ZNF202O95125 648 aa9.65□□□□□ -0.87
TTC28-208ENST00000612946 ANKRD35Q8N283 1001 aa9.65□□□□□ -0.87
TTC28-208ENST00000612946 RBM8AQ9Y5S9 174 aaKnown RBP9.65□□□□□ -0.87
TTC28-208ENST00000612946 POSTNQ15063 836 aa9.65□□□□□ -0.87
TTC28-208ENST00000612946 Q6ZUG5 572 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 TMEM87AQ8NBN3 555 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 DBF4Q9UBU7 674 aaPredicted RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 NFE2L3Q9Y4A8 694 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 LRRIQ3A6PVS8 624 aaPredicted RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 MCF2LO15068 1137 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 AFMP43652 599 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 DIXDC1Q155Q3 683 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 SLC44A4Q53GD3 710 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 KLF18A0A0U1RQI7 1052 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 A0A1B0GVL5 298 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 CALUO43852 315 aaPredicted RBP9.64□□□□□ -0.87
TTC28-208ENST00000612946 AMFRQ9UKV5 643 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 CTNND2Q9UQB3 1225 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 IGF1RP08069 1367 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 SYCP2Q9BX26 1530 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 TTI1O43156 1089 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
TTC28-208ENST00000612946 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms