RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 RTP1P59025 263 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 ATP2B2Q01814 1243 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 USP17L24Q0WX57 530 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 G3BP1Q13283 466 aaKnown RBP eCLIP21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 ZNF236Q9UL36 1845 aa21.1■□□□□ 0.97
CSNK1E-215ENST00000612795 SLC15A5A6NIM6 579 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 GH2P01242 217 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 CT47B1P0C2W7 299 aaPredicted RBP21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 PPP4CP60510 307 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 POTEEQ6S8J3 1075 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 ADGRA1Q86SQ6 560 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 C12orf42Q96LP6 360 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 ATP11BQ9Y2G3 1177 aa21.09■□□□□ 0.97
CSNK1E-215ENST00000612795 VCANP13611 3396 aa21.08■□□□□ 0.97
CSNK1E-215ENST00000612795 CNMDO75829 334 aa21.08■□□□□ 0.97
CSNK1E-215ENST00000612795 PTPREP23469 700 aa21.08■□□□□ 0.97
CSNK1E-215ENST00000612795 PRDM5Q9NQX1 630 aaPredicted RBP21.08■□□□□ 0.97
CSNK1E-215ENST00000612795 EYSQ5T1H1 3165 aa21.08■□□□□ 0.96
CSNK1E-215ENST00000612795 NAV1Q8NEY1 1877 aa21.07■□□□□ 0.96
CSNK1E-215ENST00000612795 CYP2C19P33261 490 aa21.07■□□□□ 0.96
CSNK1E-215ENST00000612795 USP14P54578 494 aa21.07■□□□□ 0.96
CSNK1E-215ENST00000612795 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
CSNK1E-215ENST00000612795 MAFAQ8NHW3 353 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-215ENST00000612795 CDX2Q99626 313 aaPredicted RBP21.07■□□□□ 0.96
CSNK1E-215ENST00000612795 MYH8P13535 1937 aa21.06■□□□□ 0.96
CSNK1E-215ENST00000612795 KBTBD13C9JR72 458 aa21.06■□□□□ 0.96
CSNK1E-215ENST00000612795 GRB14Q14449 540 aa21.06■□□□□ 0.96
CSNK1E-215ENST00000612795 RAB3GAP1Q15042 981 aa21.06■□□□□ 0.96
CSNK1E-215ENST00000612795 GJC2Q5T442 439 aaPredicted RBP21.06■□□□□ 0.96
CSNK1E-215ENST00000612795 HOXC6P09630 235 aa21.05■□□□□ 0.96
CSNK1E-215ENST00000612795 VCAM1P19320 739 aa21.05■□□□□ 0.96
CSNK1E-215ENST00000612795 SHHQ15465 462 aa21.05■□□□□ 0.96
CSNK1E-215ENST00000612795 CATSPERGQ6ZRH7 1159 aa21.05■□□□□ 0.96
CSNK1E-215ENST00000612795 ARRDC4Q8NCT1 418 aa21.05■□□□□ 0.96
CSNK1E-215ENST00000612795 NPLOC4Q8TAT6 608 aa21.05■□□□□ 0.96
CSNK1E-215ENST00000612795 A0A0G2JMZ2 1700 aa21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 MYCNP04198 464 aaPredicted RBP21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 GNAI2P04899 355 aa21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 CYP2E1P05181 493 aaPredicted RBP21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 USP5P45974 858 aa21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 DYNLL1P63167 89 aaKnown RBP21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 BTBD7Q9P203 1132 aa21.04■□□□□ 0.96
CSNK1E-215ENST00000612795 PNMA6EA0A0J9YXQ4 647 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 CYBAP13498 195 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 CYP7A1P22680 504 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 C9orf50Q5SZB4 431 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 LBX2Q6XYB7 198 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 DPP9Q86TI2 863 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 TRPV1Q8NER1 839 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 DBNDD2Q9BQY9 259 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 KIAA1683Q9H0B3 1180 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 SEMA6BQ9H3T3 888 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 SERPINB13Q9UIV8 391 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 CDH23Q9H251 3354 aa21.03■□□□□ 0.96
CSNK1E-215ENST00000612795 ZNFX1Q9P2E3 1918 aaKnown RBP21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 SPDYE16A6NNV3 312 aaPredicted RBP21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 OS9Q13438 667 aaPredicted RBP21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 ABCB5Q2M3G0 1257 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 TNNI3KQ59H18 835 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 ANO1Q5XXA6 986 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 TATDN1Q6P1N9 297 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 SLC39A5Q6ZMH5 540 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 MYLIPQ8WY64 445 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 ARHGAP45Q92619 1136 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 RPAP3Q9H6T3 665 aaPredicted RBP21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 CABP5Q9NP86 173 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 FPGT-TNNI3KV9GXZ4 949 aa21.02■□□□□ 0.96
CSNK1E-215ENST00000612795 IGSF3O75054 1194 aa21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 FOSL2P15408 326 aa21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 TRIM60Q495X7 471 aa21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 CERKLQ49MI3 558 aaPredicted RBP21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 TRMT2AQ8IZ69 625 aaKnown RBP21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 MIGA1Q8NAN2 632 aa21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 BADQ92934 168 aa21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 EHD4Q9H223 541 aa21.01■□□□□ 0.95
CSNK1E-215ENST00000612795 SPTBN5Q9NRC6 3674 aaKnown RBP21■□□□□ 0.95
CSNK1E-215ENST00000612795 ADORA2AP29274 412 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 ZAP70P43403 619 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 SMAD3P84022 425 aaKnown RBP21■□□□□ 0.95
CSNK1E-215ENST00000612795 CERS3Q8IU89 383 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 ACER1Q8TDN7 264 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 GPR108Q9NPR9 543 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 PIH1D3Q9NQM4 214 aaKnown RBP21■□□□□ 0.95
CSNK1E-215ENST00000612795 PDLIM7Q9NR12 457 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 PLXNA1Q9UIW2 1896 aa21■□□□□ 0.95
CSNK1E-215ENST00000612795 IDH1O75874 414 aaKnown RBP20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 RARSP54136 660 aaKnown RBP20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 OLFML2BQ68BL8 750 aa20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 TTC6Q86TZ1 520 aa20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 PRDM6Q9NQX0 595 aa20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 COL11A1P12107 1806 aaPredicted RBP20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 SMCHD1A6NHR9 2005 aa20.99■□□□□ 0.95
CSNK1E-215ENST00000612795 ZNF316A6NFI3 1004 aaPredicted RBP20.98■□□□□ 0.95
CSNK1E-215ENST00000612795 SEPT4O43236 478 aa20.98■□□□□ 0.95
CSNK1E-215ENST00000612795 ZNF512BQ96KM6 892 aaPredicted RBP20.98■□□□□ 0.95
CSNK1E-215ENST00000612795 TTYH1Q9H313 450 aaPredicted RBP20.98■□□□□ 0.95
CSNK1E-215ENST00000612795 SLC5A4Q9NY91 659 aa20.98■□□□□ 0.95
CSNK1E-215ENST00000612795 PRUNE2Q8WUY3 3088 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms