RNA–Protein interactions for RNA: ENST00000612674.1

USP12-202, Transcript of ubiquitin specific peptidase 12, humanhuman

TSL 2

Gene USP12, Length 712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP12-202ENST00000612674 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 ATCAYQ86WG3 371 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 SHISA5Q8N114 240 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 FBXL6Q8N531 539 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 C1orf127Q8N9H9 656 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 NLGN2Q8NFZ4 835 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
USP12-202ENST00000612674 SOX13Q9UN79 622 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 LEMD3Q9Y2U8 911 aa8.65□□□□□ -1.02
USP12-202ENST00000612674 PDE2AO00408 941 aaPredicted RBP8.64□□□□□ -1.03
USP12-202ENST00000612674 SRPK2P78362 688 aaKnown RBP8.64□□□□□ -1.03
USP12-202ENST00000612674 NFXL1Q6ZNB6 911 aa8.64□□□□□ -1.03
USP12-202ENST00000612674 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
USP12-202ENST00000612674 C14orf93Q9H972 538 aaKnown RBP8.64□□□□□ -1.03
USP12-202ENST00000612674 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
USP12-202ENST00000612674 ARHGEF28Q8N1W1 1705 aaKnown RBP8.63□□□□□ -1.03
USP12-202ENST00000612674 FOSL1P15407 271 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 CES1P23141 567 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 C19orf57Q0VDD7 668 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 XKR5Q6UX68 686 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 DNAJC5GQ8N7S2 189 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 TMPRSS13Q9BYE2 586 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 ANGEL1Q9UNK9 670 aaKnown RBP8.63□□□□□ -1.03
USP12-202ENST00000612674 RGPD5Q99666 1765 aa8.63□□□□□ -1.03
USP12-202ENST00000612674 ZNF827Q17R98 1081 aa8.62□□□□□ -1.03
USP12-202ENST00000612674 TMEM164Q5U3C3 297 aa8.62□□□□□ -1.03
USP12-202ENST00000612674 CBLL1Q75N03 491 aa8.62□□□□□ -1.03
USP12-202ENST00000612674 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
USP12-202ENST00000612674 RETREG2Q8NC44 543 aa8.62□□□□□ -1.03
USP12-202ENST00000612674 GIMAP7Q8NHV1 300 aa8.62□□□□□ -1.03
USP12-202ENST00000612674 PCNTO95613 3336 aa8.62□□□□□ -1.03
USP12-202ENST00000612674 SOX1O00570 391 aaPredicted RBP8.61□□□□□ -1.03
USP12-202ENST00000612674 TIAF1O95411 115 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 PRNPP04156 253 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 ARL4DP49703 201 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 OGFOD2Q6N063 350 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 TOM1L2Q6ZVM7 507 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 OSBPL1AQ9BXW6 950 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 GGNBP2Q9H3C7 697 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 SUGCTQ9HAC7 445 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 COL18A1P39060 1754 aa8.61□□□□□ -1.03
USP12-202ENST00000612674 USP19O94966 1318 aa8.6□□□□□ -1.03
USP12-202ENST00000612674 DLGAP3O95886 979 aa8.6□□□□□ -1.03
USP12-202ENST00000612674 VN1R5Q7Z5H4 357 aa8.6□□□□□ -1.03
USP12-202ENST00000612674 AEBP1Q8IUX7 1158 aa8.6□□□□□ -1.03
USP12-202ENST00000612674 TMEM102Q8N9M5 508 aaPredicted RBP8.6□□□□□ -1.03
USP12-202ENST00000612674 SMG8Q8ND04 991 aaKnown RBP8.6□□□□□ -1.03
USP12-202ENST00000612674 CLP1Q92989 425 aaKnown RBP8.6□□□□□ -1.03
USP12-202ENST00000612674 CHRDQ9H2X0 955 aa8.6□□□□□ -1.03
USP12-202ENST00000612674 SEPT3Q9UH03 358 aa8.6□□□□□ -1.03
USP12-202ENST00000612674 BRD4O60885 1362 aaPredicted RBP8.6□□□□□ -1.03
USP12-202ENST00000612674 PIK3C2AO00443 1686 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 TRPM1Q7Z4N2 1603 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.59□□□□□ -1.03
USP12-202ENST00000612674 LOC100289279A0A1B0GTE1 492 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 GCP02774 474 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 JAG1P78504 1218 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 COL19A1Q14993 1142 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 CPSF6Q16630 551 aaKnown RBP eCLIP8.59□□□□□ -1.03
USP12-202ENST00000612674 EDEM1Q92611 657 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 NXPE3Q969Y0 559 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 ADGRB1O14514 1584 aa8.59□□□□□ -1.03
USP12-202ENST00000612674 TNS2Q63HR2 1409 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 FAM95CA0A1B0GW59 222 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 A6NHS1 94 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 ATG7O95352 703 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 DRD2P14416 443 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 IKBKEQ14164 716 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 NFKBIBQ15653 356 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 JMYQ8N9B5 988 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 BSNDQ8WZ55 320 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 USP26Q9BXU7 913 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 TRAK1Q9UPV9 953 aa8.58□□□□□ -1.04
USP12-202ENST00000612674 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
USP12-202ENST00000612674 PNPLA7Q6ZV29 1317 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 WDR17Q8IZU2 1322 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 EXOC5O00471 708 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 TOMM70O94826 608 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 RPLP1P05386 114 aaKnown RBP8.57□□□□□ -1.04
USP12-202ENST00000612674 ADMP35318 185 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 VSIG10LQ86VR7 867 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 FBXL18Q96ME1 805 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 OSMRQ99650 979 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 ZKSCAN3Q9BRR0 538 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 ABCC6O95255 1503 aa8.57□□□□□ -1.04
USP12-202ENST00000612674 ACEP12821 1306 aa8.56□□□□□ -1.04
USP12-202ENST00000612674 USP6P35125 1406 aa8.56□□□□□ -1.04
USP12-202ENST00000612674 DNM1Q05193 864 aaKnown RBP8.56□□□□□ -1.04
USP12-202ENST00000612674 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
USP12-202ENST00000612674 TFCP2L1Q9NZI6 479 aa8.56□□□□□ -1.04
USP12-202ENST00000612674 WWC3Q9ULE0 1092 aa8.56□□□□□ -1.04
USP12-202ENST00000612674 SLIT3O75094 1523 aa8.55□□□□□ -1.04
USP12-202ENST00000612674 LY75O60449 1722 aa8.55□□□□□ -1.04
USP12-202ENST00000612674 PDGFAP04085 211 aa8.55□□□□□ -1.04
USP12-202ENST00000612674 ITGB5P18084 799 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms