RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	CTR9	Q6PD62	1173 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	METTL16	Q86W50	562 aa	Known RBP	13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	IFNL3	Q8IZI9	196 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	SLC44A5	Q8NCS7	719 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	RUFY2	Q8WXA3	655 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	DYNLL2	Q96FJ2	89 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	PARK7	Q99497	189 aa	Known RBP	13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	SRRD	Q9UH36	339 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	ZHX2	Q9Y6X8	837 aa		13.34	□□□□□ -0.27
FGFR2-223	ENST00000611527	GREB1L	Q9C091	1923 aa	Predicted RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	CEP290	O15078	2479 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527		A0A0G2JLL6	359 aa	Predicted RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	FMNL1	O95466	1100 aa	Predicted RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	HSPD1	P10809	573 aa	Known RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	SHMT1	P34896	483 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	GABPA	Q06546	454 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	RRP1B	Q14684	758 aa	Known RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	SBK1	Q52WX2	424 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	PCDH10	Q9P2E7	1040 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	ZMYM6	O95789	1325 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	MYPN	Q86TC9	1320 aa		13.33	□□□□□ -0.28
FGFR2-223	ENST00000611527	MINDY4B	A8MYZ0	360 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	SGSM2	O43147	1006 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	GDF11	O95390	407 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	BCR	P11274	1271 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	MTFR1	Q15390	333 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	HABP4	Q5JVS0	413 aa	Known RBP	13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	GADL1	Q6ZQY3	521 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	CCDC84	Q86UT8	332 aa	Predicted RBP	13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	RAET1E	Q8TD07	263 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	ESYT1	Q9BSJ8	1104 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	AFG3L2	Q9Y4W6	797 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	LOC285556	D6RIA3	1793 aa		13.32	□□□□□ -0.28
FGFR2-223	ENST00000611527	TRIM75P	A6NK02	468 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	CTNND1	O60716	968 aa	Known RBP	13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	HOXD10	P28358	340 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	GRK4	P32298	578 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	PRKCZ	Q05513	592 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	PPARA	Q07869	468 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	ALX1	Q15699	326 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	CASC1	Q6TDU7	716 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	C16orf86	Q6ZW13	317 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	FASTKD5	Q7L8L6	764 aa	Known RBP	13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	STK11IP	Q8N1F8	1099 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	SHISA4	Q96DD7	197 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	DSCC1	Q9BVC3	393 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	SWAP70	Q9UH65	585 aa		13.31	□□□□□ -0.28
FGFR2-223	ENST00000611527	FGA	P02671	866 aa		13.3	□□□□□ -0.28
FGFR2-223	ENST00000611527	CAP2	P40123	477 aa		13.3	□□□□□ -0.28
FGFR2-223	ENST00000611527	FCGRT	P55899	365 aa		13.3	□□□□□ -0.28
FGFR2-223	ENST00000611527	ZBTB21	Q9ULJ3	1066 aa		13.3	□□□□□ -0.28
FGFR2-223	ENST00000611527	CDK8	P49336	464 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	HAND2	P61296	217 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	JAG1	P78504	1218 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	PTH1R	Q03431	593 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	TATDN1	Q6P1N9	297 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	TAOK2	Q9UL54	1235 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	GABRQ	Q9UN88	632 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	SLC45A1	Q9Y2W3	748 aa		13.29	□□□□□ -0.28
FGFR2-223	ENST00000611527	GH2	P01242	217 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	SLC3A2	P08195	630 aa	Known RBP	13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	ASNS	P08243	561 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	CCL5	P13501	91 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	AKR1B1	P15121	316 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	CTDSPL2	Q05D32	466 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	ABCB5	Q2M3G0	1257 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	CERKL	Q49MI3	558 aa	Predicted RBP	13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	TREML2	Q5T2D2	321 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	TBC1D10C	Q8IV04	446 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	NBPF3	Q9H094	633 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	BIN2	Q9UBW5	565 aa	Predicted RBP	13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	ANAPC4	Q9UJX5	808 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	AGTPBP1	Q9UPW5	1226 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527	MYH4	Q9Y623	1939 aa		13.28	□□□□□ -0.28
FGFR2-223	ENST00000611527		H0YGN5	161 aa		13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	MPHOSPH10	O00566	681 aa	Known RBP	13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	PRDM1	O75626	825 aa		13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	RASA1	P20936	1047 aa		13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	LSG1	Q9H089	658 aa	Known RBP	13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	RNF208	Q9H0X6	261 aa		13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	ANO2	Q9NQ90	1003 aa		13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	PLIN4	Q96Q06	1357 aa		13.27	□□□□□ -0.29
FGFR2-223	ENST00000611527	TNPO2	O14787	897 aa	Known RBP	13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	GJB1	P08034	283 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	ELN	P15502	786 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	NEDD4	P46934	1319 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	GJA8	P48165	433 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	FLT3LG	P49771	235 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	UBXN2A	P68543	259 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	PDE4B	Q07343	736 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	RAB3GAP1	Q15042	981 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	KIAA1211	Q6ZU35	1233 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	CLEC10A	Q8IUN9	316 aa		13.26	□□□□□ -0.29
FGFR2-223	ENST00000611527	SLAIN1	Q8ND83	568 aa		13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms