RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 Q9Y3F1 56 aa8.61□□□□□ -1.03
CBWD1-219ENST00000611457 CST5P28325 142 aaPredicted RBP8.61□□□□□ -1.03
CBWD1-219ENST00000611457 CTR9Q6PD62 1173 aa8.61□□□□□ -1.03
CBWD1-219ENST00000611457 DCAF4Q8WV16 495 aa8.61□□□□□ -1.03
CBWD1-219ENST00000611457 DNAJC25-GNG10A0A024R161 153 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 SLC25A27O95847 323 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 OSBPP22059 807 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 ARID2Q68CP9 1835 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 CHD1LQ86WJ1 897 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 NKX2-3Q8TAU0 364 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 SYNGAP1Q96PV0 1343 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 CCDC85AQ96PX6 553 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 HOXD10P28358 340 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 ZFPM1Q8IX07 1006 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 UBE2Q2LH0YL09 131 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 STRNO43815 780 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 OTOP1Q7RTM1 612 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 ZNF526Q8TF50 670 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-219ENST00000611457 EPB41L4AQ9HCS5 686 aaPredicted RBP8.6□□□□□ -1.03
CBWD1-219ENST00000611457 SRRDQ9UH36 339 aa8.6□□□□□ -1.03
CBWD1-219ENST00000611457 CRHR2Q13324 411 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 GSE1Q14687 1217 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 POTEEQ6S8J3 1075 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 WRNIP1Q96S55 665 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 MROH8Q9H579 483 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 EMILIN3Q9NT22 766 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 BMP8BP34820 402 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 TTC22Q5TAA0 569 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 CENPQQ7L2Z9 268 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-219ENST00000611457 RIOX2Q8IUF8 465 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
CBWD1-219ENST00000611457 MCOLN1Q9GZU1 580 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 KANSL2Q9H9L4 492 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.59□□□□□ -1.03
CBWD1-219ENST00000611457 SCN10AQ9Y5Y9 1956 aa8.59□□□□□ -1.03
CBWD1-219ENST00000611457 CCL15-CCL14A0A0B4J2E2 113 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 COL6A1P12109 1028 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 RASA1P20936 1047 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 CYP7A1P22680 504 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 DSG3P32926 999 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 EVCP57679 992 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 SP3Q02447 781 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 CCL15Q16663 113 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 FAM160B2Q86V87 743 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 ZNF296Q8WUU4 475 aaPredicted RBP8.59□□□□□ -1.04
CBWD1-219ENST00000611457 ABHD8Q96I13 439 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 CLMNQ96JQ2 1002 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 VCPKMTQ9H867 229 aa8.59□□□□□ -1.04
CBWD1-219ENST00000611457 PTPRSQ13332 1948 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 BMP2KLQ5H9B9 411 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 LCORLQ8N3X6 602 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 CRBNQ96SW2 442 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 OGDHLQ9ULD0 1010 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 AGXT2Q9BYV1 514 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 SIL1Q9H173 461 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 PICK1Q9NRD5 415 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 HPS5Q9UPZ3 1129 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 CCDC171Q6TFL3 1326 aa8.58□□□□□ -1.04
CBWD1-219ENST00000611457 USP17L10C9JJH3 530 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 HOXD8P13378 290 aaPredicted RBP8.57□□□□□ -1.04
CBWD1-219ENST00000611457 FCGRTP55899 365 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 DGKHQ86XP1 1220 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 LRP2BPQ9P2M1 347 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 EXOC6BQ9Y2D4 811 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 RBL2Q08999 1139 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 ZIC5Q96T25 663 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 TSEN34Q9BSV6 310 aaKnown RBP8.57□□□□□ -1.04
CBWD1-219ENST00000611457 RANBP17Q9H2T7 1088 aaKnown RBP8.57□□□□□ -1.04
CBWD1-219ENST00000611457 FEM1BQ9UK73 627 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 TCP10L2B9ZVM9 353 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 PDHXO00330 501 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 MCMDC2Q4G0Z9 681 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 OSBP2Q969R2 916 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
CBWD1-219ENST00000611457 JAG1P78504 1218 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 CDAN1Q8IWY9 1227 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 CHST13Q8NET6 341 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 NBPF3Q9H094 633 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 CLRN2A0PK11 232 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 M0R2C6 588 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 MSCO60682 206 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 INPP5BP32019 993 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 CDK8P49336 464 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 LBX1P52954 281 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 CHAF1AQ13111 956 aaPredicted RBP8.56□□□□□ -1.04
CBWD1-219ENST00000611457 SLC9C2Q5TAH2 1124 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 APBA2Q99767 749 aa8.56□□□□□ -1.04
CBWD1-219ENST00000611457 ELP3Q9H9T3 547 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms