RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
SNCA-212ENST00000611107 RBBP6Q7Z6E9 1792 aaKnown RBP10.43□□□□□ -0.74
SNCA-212ENST00000611107 GPAA1O43292 621 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 CNMDO75829 334 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 ASNSP08243 561 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 CDK8P49336 464 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 PRKCZQ05513 592 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 RAB3GAP1Q15042 981 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 PKN2Q16513 984 aaKnown RBP10.42□□□□□ -0.74
SNCA-212ENST00000611107 ABCB5Q2M3G0 1257 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 ZMYM1Q5SVZ6 1142 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 VPS53Q5VIR6 699 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 TTC6Q86TZ1 520 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 PROCA1Q8NCQ7 364 aaPredicted RBP10.42□□□□□ -0.74
SNCA-212ENST00000611107 APPBP2Q92624 585 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 PPP4R2Q9NY27 417 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 SLC45A1Q9Y2W3 748 aa10.42□□□□□ -0.74
SNCA-212ENST00000611107 COL11A1P12107 1806 aaPredicted RBP10.42□□□□□ -0.74
SNCA-212ENST00000611107 USP17L10C9JJH3 530 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 GSPT1P15170 499 aaKnown RBP10.41□□□□□ -0.74
SNCA-212ENST00000611107 MTFR1Q15390 333 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 TMED8Q6PL24 325 aaPredicted RBP10.41□□□□□ -0.74
SNCA-212ENST00000611107 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 ARMC5Q96C12 935 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 FAM227BQ96M60 508 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
SNCA-212ENST00000611107 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.41□□□□□ -0.74
SNCA-212ENST00000611107 RBPJLQ9UBG7 517 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 SRRDQ9UH36 339 aa10.41□□□□□ -0.74
SNCA-212ENST00000611107 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.74
SNCA-212ENST00000611107 EN2P19622 333 aaPredicted RBP10.4□□□□□ -0.74
SNCA-212ENST00000611107 HOXA7P31268 230 aaPredicted RBP10.4□□□□□ -0.74
SNCA-212ENST00000611107 TTC22Q5TAA0 569 aa10.4□□□□□ -0.74
SNCA-212ENST00000611107 ZNF333Q96JL9 665 aa10.4□□□□□ -0.74
SNCA-212ENST00000611107 TRIM34Q9BYJ4 488 aa10.4□□□□□ -0.74
SNCA-212ENST00000611107 ATP8A2Q9NTI2 1148 aa10.4□□□□□ -0.74
SNCA-212ENST00000611107 A0A0G2JMZ2 1700 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 ZNFX1Q9P2E3 1918 aaKnown RBP10.39□□□□□ -0.75
SNCA-212ENST00000611107 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 MPHOSPH10O00566 681 aaKnown RBP10.39□□□□□ -0.75
SNCA-212ENST00000611107 FMNL1O95466 1100 aaPredicted RBP10.39□□□□□ -0.75
SNCA-212ENST00000611107 ELNP15502 786 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 VCAM1P19320 739 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 RASA1P20936 1047 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 HERVK_113P62684 666 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 TRIM32Q13049 653 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 USP17L2Q6R6M4 530 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 ZNF589Q86UQ0 364 aaPredicted RBP10.39□□□□□ -0.75
SNCA-212ENST00000611107 CERS3Q8IU89 383 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 C12orf42Q96LP6 360 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 FSD1Q9BTV5 496 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 PORCNQ9H237 461 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 IL25Q9H293 177 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 AS3MTQ9HBK9 375 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 BTBD7Q9P203 1132 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 GJD2Q9UKL4 321 aa10.39□□□□□ -0.75
SNCA-212ENST00000611107 MYPNQ86TC9 1320 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 MINDY4BA8MYZ0 360 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 C19orf81C9J6K1 198 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 PRDM1O75626 825 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 FLT3LGP49771 235 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 FAM110CQ1W6H9 321 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 ZSCAN25Q6NSZ9 544 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 SMCR8Q8TEV9 937 aaPredicted RBP10.38□□□□□ -0.75
SNCA-212ENST00000611107 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 TBC1D2Q9BYX2 928 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 KIAA1683Q9H0B3 1180 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 GINM1Q9NU53 330 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 MORF4L1Q9UBU8 362 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 ROBO3Q96MS0 1386 aa10.38□□□□□ -0.75
SNCA-212ENST00000611107 SPDYE16A6NNV3 312 aaPredicted RBP10.37□□□□□ -0.75
SNCA-212ENST00000611107 FCGRTP55899 365 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 NMIQ13287 307 aaPredicted RBP10.37□□□□□ -0.75
SNCA-212ENST00000611107 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 SPICE1Q8N0Z3 855 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 PAGR1Q9BTK6 254 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 RPAP3Q9H6T3 665 aaPredicted RBP10.37□□□□□ -0.75
SNCA-212ENST00000611107 TMOD4Q9NZQ9 345 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 ALPK3Q96L96 1907 aa10.37□□□□□ -0.75
SNCA-212ENST00000611107 IGKV6D-41A0A0C4DH26 115 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 PATL2C9JE40 543 aaKnown RBP10.36□□□□□ -0.75
SNCA-212ENST00000611107 ZFYP08048 801 aaPredicted RBP10.36□□□□□ -0.75
SNCA-212ENST00000611107 EEF2P13639 858 aaKnown RBP10.36□□□□□ -0.75
SNCA-212ENST00000611107 IRX3P78415 501 aaPredicted RBP10.36□□□□□ -0.75
SNCA-212ENST00000611107 MLLT1Q03111 559 aaPredicted RBP10.36□□□□□ -0.75
SNCA-212ENST00000611107 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 KIF22Q14807 665 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 SLC9C1Q4G0N8 1177 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 TMEM179Q6ZVK1 233 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 NUP88Q99567 741 aaPredicted RBP10.36□□□□□ -0.75
SNCA-212ENST00000611107 FEZ1Q99689 392 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
SNCA-212ENST00000611107 CABP5Q9NP86 173 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms