RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 PLEKHH3Q7Z736 793 aa14.47□□□□□ -0.09
FDPS-220ENST00000611010 TRPV1Q8NER1 839 aa14.47□□□□□ -0.09
FDPS-220ENST00000611010 COL25A1Q9BXS0 654 aaPredicted RBP14.47□□□□□ -0.09
FDPS-220ENST00000611010 FPGT-TNNI3KV9GXZ4 949 aa14.47□□□□□ -0.09
FDPS-220ENST00000611010 POTEB2H3BUK9 544 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 MAP2K5Q13163 448 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 POLA2Q14181 598 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 PDE3AQ14432 1141 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 NPLOC4Q8TAT6 608 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 BTBD7Q9P203 1132 aa14.46□□□□□ -0.09
FDPS-220ENST00000611010 DBNLQ9UJU6 430 aaKnown RBP14.46□□□□□ -0.09
FDPS-220ENST00000611010 BAZ2AQ9UIF9 1905 aaKnown RBP14.45□□□□□ -0.1
FDPS-220ENST00000611010 GNAI2P04899 355 aa14.45□□□□□ -0.1
FDPS-220ENST00000611010 VCAM1P19320 739 aa14.45□□□□□ -0.1
FDPS-220ENST00000611010 USP17L2Q6R6M4 530 aa14.45□□□□□ -0.1
FDPS-220ENST00000611010 FOXP4Q8IVH2 680 aaPredicted RBP14.45□□□□□ -0.1
FDPS-220ENST00000611010 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
FDPS-220ENST00000611010 CRACR2BQ8N4Y2 399 aaPredicted RBP14.45□□□□□ -0.1
FDPS-220ENST00000611010 ACER1Q8TDN7 264 aa14.45□□□□□ -0.1
FDPS-220ENST00000611010 GPR108Q9NPR9 543 aa14.45□□□□□ -0.1
FDPS-220ENST00000611010 GINM1Q9NU53 330 aa14.45□□□□□ -0.1
FDPS-220ENST00000611010 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
FDPS-220ENST00000611010 BCAR3O75815 825 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 BAG3O95817 575 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 PLCG2P16885 1265 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 GUCY1A2P33402 732 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.11e-7■■■□□ 14.7
FDPS-220ENST00000611010 GRB14Q14449 540 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 TTC39AQ5SRH9 613 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 ERICH6BQ5W0A0 696 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 CLUAP1Q96AJ1 413 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 NOL10Q9BSC4 688 aaKnown RBP14.44□□□□□ -0.1
FDPS-220ENST00000611010 RABGAP1Q9Y3P9 1069 aa14.44□□□□□ -0.1
FDPS-220ENST00000611010 SMCHD1A6NHR9 2005 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 HOXC6P09630 235 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 CYBAP13498 195 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 PTPREP23469 700 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 SHMT1P34896 483 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 ATN1P54259 1190 aaPredicted RBP14.43□□□□□ -0.1
FDPS-220ENST00000611010 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 LBX2Q6XYB7 198 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 CATSPERGQ6ZRH7 1159 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 SSH3Q8TE77 659 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 GTF3C2Q8WUA4 911 aaPredicted RBP14.43□□□□□ -0.1
FDPS-220ENST00000611010 ZNF512BQ96KM6 892 aaPredicted RBP14.43□□□□□ -0.1
FDPS-220ENST00000611010 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 SENP6Q9GZR1 1112 aaPredicted RBP14.43□□□□□ -0.1
FDPS-220ENST00000611010 C1orf115Q9H7X2 142 aa14.43□□□□□ -0.1
FDPS-220ENST00000611010 DDX20Q9UHI6 824 aaKnown RBP14.43□□□□□ -0.1
FDPS-220ENST00000611010 CYP2C19P33261 490 aa14.42□□□□□ -0.1
FDPS-220ENST00000611010 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
FDPS-220ENST00000611010 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
FDPS-220ENST00000611010 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
FDPS-220ENST00000611010 EHD4Q9H223 541 aa14.42□□□□□ -0.1
FDPS-220ENST00000611010 ANTXR1Q9H6X2 564 aa14.42□□□□□ -0.1
FDPS-220ENST00000611010 MYH7P12883 1935 aa14.42□□□□□ -0.1
FDPS-220ENST00000611010 GREB1LQ9C091 1923 aaPredicted RBP14.41□□□□□ -0.1
FDPS-220ENST00000611010 SLC15A5A6NIM6 579 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L15C9J2P7 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L13C9JLJ4 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L11C9JVI0 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L18D6R9N7 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L22D6RA61 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L17D6RBQ6 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L19D6RCP7 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L20D6RJB6 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 HLA-DOAP06340 250 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 CYP7A1P22680 504 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 PLCD1P51178 756 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 RTP1P59025 263 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 USP17L24Q0WX57 530 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 KIAA1755Q5JYT7 1200 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 C9orf50Q5SZB4 431 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 FAM109BQ6ICB4 259 aaPredicted RBP14.41□□□□□ -0.1
FDPS-220ENST00000611010 EAF2Q96CJ1 260 aaPredicted RBP14.41□□□□□ -0.1
FDPS-220ENST00000611010 TRIM34Q9BYJ4 488 aa14.41□□□□□ -0.1
FDPS-220ENST00000611010 A0A1W2PRG0 241 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 CCDC158Q5M9N0 1113 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 WDR78Q5VTH9 848 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 LPAR1Q92633 364 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 FEZ1Q99689 392 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 RIOK1Q9BRS2 568 aaKnown RBP14.4□□□□□ -0.1
FDPS-220ENST00000611010 RPAP3Q9H6T3 665 aaPredicted RBP14.4□□□□□ -0.1
FDPS-220ENST00000611010 SERPINB13Q9UIV8 391 aa14.4□□□□□ -0.1
FDPS-220ENST00000611010 DNM1LO00429 736 aa14.39□□□□□ -0.11
FDPS-220ENST00000611010 IDH1O75874 414 aaKnown RBP14.39□□□□□ -0.11
FDPS-220ENST00000611010 GABPAQ06546 454 aa14.39□□□□□ -0.11
FDPS-220ENST00000611010 SNX17Q15036 470 aa14.39□□□□□ -0.11
FDPS-220ENST00000611010 GJC2Q5T442 439 aaPredicted RBP14.39□□□□□ -0.11
FDPS-220ENST00000611010 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
FDPS-220ENST00000611010 ANO1Q5XXA6 986 aa14.39□□□□□ -0.11
FDPS-220ENST00000611010 CCAR1Q8IX12 1150 aaKnown RBP14.39□□□□□ -0.11
FDPS-220ENST00000611010 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
FDPS-220ENST00000611010 FRAT1Q92837 279 aaPredicted RBP14.39□□□□□ -0.11
FDPS-220ENST00000611010 CCDC8Q9H0W5 538 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms