RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 STX8Q9UNK0 236 aa22.33■■□□□ 1.16
COL15A1-205ENST00000610452 MSH6P52701 1360 aa22.33■■□□□ 1.16
COL15A1-205ENST00000610452 CD2BP2O95400 341 aaKnown RBP22.32■■□□□ 1.16
COL15A1-205ENST00000610452 SLC9C2Q5TAH2 1124 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 PRDM11Q9NQV5 511 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 RNF8O76064 485 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 GSPT1P15170 499 aaKnown RBP22.32■■□□□ 1.16
COL15A1-205ENST00000610452 FAM212AQ96EL1 285 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 SFMBT2Q5VUG0 894 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 CCDC13Q8IYE1 715 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 CXorf38Q8TB03 319 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 DPH5Q9H2P9 285 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 TRIM66O15016 1216 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 RRAGAQ7L523 313 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 USP28Q96RU2 1077 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 CHPF2Q9P2E5 772 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 ENC1O14682 589 aa22.32■■□□□ 1.16
COL15A1-205ENST00000610452 CAPRIN2Q6IMN6 1127 aaKnown RBP22.32■■□□□ 1.16
COL15A1-205ENST00000610452 CTNND1O60716 968 aaKnown RBP22.31■■□□□ 1.16
COL15A1-205ENST00000610452 NR1D1P20393 614 aa22.31■■□□□ 1.16
COL15A1-205ENST00000610452 GNPTABQ3T906 1256 aa22.31■■□□□ 1.16
COL15A1-205ENST00000610452 CRACR2BQ8N4Y2 399 aaPredicted RBP22.31■■□□□ 1.16
COL15A1-205ENST00000610452 STARD3NLO95772 234 aa22.31■■□□□ 1.16
COL15A1-205ENST00000610452 TBC1D1Q86TI0 1168 aaPredicted RBP22.31■■□□□ 1.16
COL15A1-205ENST00000610452 TACC3Q9Y6A5 838 aa22.31■■□□□ 1.16
COL15A1-205ENST00000610452 DIS3L2Q8IYB7 885 aaKnown RBP22.3■■□□□ 1.16
COL15A1-205ENST00000610452 C6orf50Q9HD87 102 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 FAM207AQ9NSI2 230 aaPredicted RBP22.3■■□□□ 1.16
COL15A1-205ENST00000610452 ALS2CLQ60I27 953 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 KLHL34Q8N239 644 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 SERTAD1Q9UHV2 236 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 PPP2R5EQ16537 467 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 PIK3R5Q8WYR1 880 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 CTTNBP2NLQ9P2B4 639 aa22.3■■□□□ 1.16
COL15A1-205ENST00000610452 GOLGA8FQ08AF8 430 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 GOLGA8DPQ0D2H9 430 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 FAM13AO94988 1023 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 UHMK1Q8TAS1 419 aaKnown RBP22.29■■□□□ 1.16
COL15A1-205ENST00000610452 CENPKQ9BS16 269 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 PALD1Q9ULE6 856 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 TBC1D8O95759 1140 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 C11orf57Q6ZUT1 292 aaPredicted RBP22.29■■□□□ 1.16
COL15A1-205ENST00000610452 SCYL3Q8IZE3 742 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 RGS12O14924 1447 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 SERPINB6P35237 376 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 CCDC14Q49A88 953 aa22.29■■□□□ 1.16
COL15A1-205ENST00000610452 KCNJ18B7U540 433 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 KCNJ12Q14500 433 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 MYSM1Q5VVJ2 828 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 P3H4Q92791 437 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 VPS37BQ9H9H4 285 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 TRMT112Q9UI30 125 aaKnown RBP22.28■■□□□ 1.16
COL15A1-205ENST00000610452 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 MAP3K7O43318 606 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 HELLSQ9NRZ9 838 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 AMFRQ9UKV5 643 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 NSFL1CQ9UNZ2 370 aaKnown RBP22.28■■□□□ 1.16
COL15A1-205ENST00000610452 MGEA5O60502 916 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 FAM227BQ96M60 508 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 DEXIO95424 95 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 EPB41P11171 864 aaKnown RBP22.28■■□□□ 1.16
COL15A1-205ENST00000610452 IL15P40933 162 aaPredicted RBP22.28■■□□□ 1.16
COL15A1-205ENST00000610452 LGSNQ5TDP6 509 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 POLKQ9UBT6 870 aa22.28■■□□□ 1.16
COL15A1-205ENST00000610452 BUB1O43683 1085 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 KRT24Q2M2I5 525 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 CCDC92Q53HC0 331 aaPredicted RBP22.27■■□□□ 1.16
COL15A1-205ENST00000610452 KRT40Q6A162 431 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.27■■□□□ 1.16
COL15A1-205ENST00000610452 TXLNGQ9NUQ3 528 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 PHEXP78562 749 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 ITIH3Q06033 890 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 PPP1R21Q6ZMI0 780 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 ZBTB3Q9H5J0 574 aa22.27■■□□□ 1.16
COL15A1-205ENST00000610452 MX2P20592 715 aa22.27■■□□□ 1.15
COL15A1-205ENST00000610452 KRT12Q99456 494 aa22.27■■□□□ 1.15
COL15A1-205ENST00000610452 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.27■■□□□ 1.15
COL15A1-205ENST00000610452 CD2APQ9Y5K6 639 aa22.27■■□□□ 1.15
COL15A1-205ENST00000610452 SATB1Q01826 763 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 PDCLQ13371 301 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 FBXO31Q5XUX0 539 aaPredicted RBP22.26■■□□□ 1.15
COL15A1-205ENST00000610452 CNOT10Q9H9A5 744 aaKnown RBP22.26■■□□□ 1.15
COL15A1-205ENST00000610452 EPB41L5Q9HCM4 733 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 SSH2Q76I76 1423 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 CMA1P23946 247 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 VPS41P49754 854 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 LRRC8CQ8TDW0 803 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 HEXIM1O94992 359 aaKnown RBP22.26■■□□□ 1.15
COL15A1-205ENST00000610452 SEPT2Q15019 361 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 SCINQ9Y6U3 715 aa22.26■■□□□ 1.15
COL15A1-205ENST00000610452 PDCD7Q8N8D1 485 aaKnown RBP22.25■■□□□ 1.15
COL15A1-205ENST00000610452 CRNKL1Q9BZJ0 848 aaKnown RBP22.25■■□□□ 1.15
COL15A1-205ENST00000610452 NLRC4Q9NPP4 1024 aa22.25■■□□□ 1.15
COL15A1-205ENST00000610452 GEMIN8Q9NWZ8 242 aaKnown RBP22.25■■□□□ 1.15
COL15A1-205ENST00000610452 PCDHA7Q9UN72 937 aa22.25■■□□□ 1.15
COL15A1-205ENST00000610452 CASP14P31944 242 aa22.25■■□□□ 1.15
COL15A1-205ENST00000610452 SLC4A8Q2Y0W8 1093 aa22.25■■□□□ 1.15
COL15A1-205ENST00000610452 PHACTR3Q96KR7 559 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms