RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 SCG2P13521 617 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 CCNCP24863 283 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 PMS2P54278 862 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 PABPC4Q13310 644 aaKnown RBP eCLIP5.3□□□□□ -1.562e-10■■□□□ 12.4
HDDC2-208ENST00000609021 SUZ12Q15022 739 aaKnown RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 ARHGAP27Q6ZUM4 889 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 HDGFL2Q7Z4V5 671 aaPredicted RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 APPBP2Q92624 585 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 CEP63Q96MT8 703 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 NACAP1Q9BZK3 213 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 AMOTL2Q9Y2J4 779 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 DAAM1Q9Y4D1 1078 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 PCDHGC5Q9Y5F6 944 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 PTPRMP28827 1452 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 DHX29Q7Z478 1369 aaKnown RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 POTEFA5A3E0 1075 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 B4DLN1 442 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 SGTAO43765 313 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 LUC7L3O95232 432 aaKnown RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 ENPP1P22413 925 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 MLH1P40692 756 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 POLE2P56282 527 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 TUBA3CQ13748 450 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 TAF7Q15545 349 aaPredicted RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 RNF187Q5TA31 235 aaPredicted RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 NCCRP1Q6ZVX7 275 aaPredicted RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 C14orf80Q86SX3 495 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 C11orf74Q86VG3 221 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 SNX32Q86XE0 403 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 ANKRD49Q8WVL7 239 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 ZNF653Q96CK0 615 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 CDHR1Q96JP9 859 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 RPGRIP1Q96KN7 1286 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 RHBDL2Q9NX52 303 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.3□□□□□ -1.56
HDDC2-208ENST00000609021 PCSK1NQ9UHG2 260 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 PRR12Q9ULL5 1215 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 LIMCH1Q9UPQ0 1083 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 AKAP12Q02952 1782 aa5.3□□□□□ -1.56
HDDC2-208ENST00000609021 NPATQ14207 1427 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 SCAPERQ9BY12 1400 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 KDM2BQ8NHM5 1336 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 XRN1Q8IZH2 1706 aaKnown RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 EIF3AQ14152 1382 aaKnown RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 GPRASP1Q5JY77 1395 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 BECN2A8MW95 431 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 H0Y3Z8 333 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 BIN1O00499 593 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 SUPT3HO75486 399 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 KRT14P02533 472 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CLTAP09496 248 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 H2AFXP16104 143 aaPredicted RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 HOXD10P28358 340 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 HSPA4P34932 840 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 HALP42357 657 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 MYBPC3Q14896 1274 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CLPPQ16740 277 aaPredicted RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CFAP157Q5JU67 520 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CCDC122Q5T0U0 273 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CDCA2Q69YH5 1023 aaPredicted RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 FOXR1Q6PIV2 292 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 HOMER1Q86YM7 354 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 RELL1Q8IUW5 271 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 REXO1L1PQ8IX06 675 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 TTC39CQ8N584 583 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 ZBTB8BQ8NAP8 495 aaPredicted RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 HVCN1Q96D96 273 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 ABCF3Q9NUQ8 709 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 SEPT11Q9NVA2 429 aaKnown RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 QPCTLQ9NXS2 382 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 TBK1Q9UHD2 729 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CNPY2Q9Y2B0 182 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 POTEIP0CG38 1075 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CCT5P48643 541 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 GUCY2FP51841 1108 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 LBRQ14739 615 aaKnown RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 RABL6Q3YEC7 729 aaPredicted RBP5.29□□□□□ -1.56
HDDC2-208ENST00000609021 WLSQ5T9L3 541 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 MTHFD1LQ6UB35 978 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CCDC155Q8N6L0 562 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 MAB21L3Q8N8X9 362 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 TEKT4Q8WW24 435 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 GIMAP1Q8WWP7 306 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 OPTNQ96CV9 577 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 MUC3BQ9H195 1237 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 VCX3AQ9NNX9 186 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 GJA3Q9Y6H8 435 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 CRYBG1Q9Y4K1 1723 aa5.29□□□□□ -1.56
HDDC2-208ENST00000609021 ARPC4-TTLL3A0A0A6YYG9 625 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 FAM25EA8MYX2 175 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 SSBP05455 408 aaKnown RBP eCLIP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CCT6AP40227 531 aaKnown RBP5.28□□□□□ -1.56
HDDC2-208ENST00000609021 CETN2P41208 172 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 USP11P51784 963 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 BLVRAP53004 296 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 RASA2Q15283 850 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 HSP90AA5PQ58FG0 334 aa5.28□□□□□ -1.56
HDDC2-208ENST00000609021 EMC10Q5UCC4 262 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 1652.8 ms