RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 ZC3H12CQ9C0D7 883 aaKnown RBP3.66□□□□□ -1.82
ITGB5-213ENST00000608945 PRDM14Q9GZV8 571 aa3.66□□□□□ -1.82
ITGB5-213ENST00000608945 A0A1W2PP55 124 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 SFRP5Q5T4F7 317 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 CREG2Q8IUH2 290 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 ADAMTS19Q8TE59 1207 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 ZG16BQ96DA0 208 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 CCDC97Q96F63 343 aaPredicted RBP3.65□□□□□ -1.83
ITGB5-213ENST00000608945 KLC2Q9H0B6 622 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 TACC3Q9Y6A5 838 aa3.65□□□□□ -1.83
ITGB5-213ENST00000608945 SLITRK5O94991 958 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 SDHBP21912 280 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 GRIA4P48058 902 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 LIMS1P48059 325 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 MVKQ03426 396 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 DPYDQ12882 1025 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 CCDC142Q17RM4 750 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 NLRX1Q86UT6 975 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 AMER2Q8N7J2 671 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 NUDT16Q96DE0 195 aaKnown RBP3.64□□□□□ -1.83
ITGB5-213ENST00000608945 UCN2Q96RP3 112 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
ITGB5-213ENST00000608945 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.64□□□□□ -1.83
ITGB5-213ENST00000608945 TFIP11Q9UBB9 837 aaKnown RBP3.64□□□□□ -1.83
ITGB5-213ENST00000608945 BUB1BO60566 1050 aaPredicted RBP3.63□□□□□ -1.83
ITGB5-213ENST00000608945 PLA2G1BP04054 148 aaKnown RBP3.63□□□□□ -1.83
ITGB5-213ENST00000608945 FBLP22087 321 aaKnown RBP3.63□□□□□ -1.83
ITGB5-213ENST00000608945 IGFBP6P24592 240 aaPredicted RBP3.63□□□□□ -1.83
ITGB5-213ENST00000608945 NCKAP1LP55160 1127 aa3.63□□□□□ -1.83
ITGB5-213ENST00000608945 FKBP5Q13451 457 aaPredicted RBP3.63□□□□□ -1.83
ITGB5-213ENST00000608945 KRTAP1-5Q9BYS1 174 aa3.63□□□□□ -1.83
ITGB5-213ENST00000608945 PPP1R12CQ9BZL4 782 aa3.63□□□□□ -1.83
ITGB5-213ENST00000608945 SERPINA10Q9UK55 444 aa3.63□□□□□ -1.83
ITGB5-213ENST00000608945 MAFBQ9Y5Q3 323 aaPredicted RBP3.63□□□□□ -1.83
ITGB5-213ENST00000608945 EDN3P14138 238 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 LMOD1P29536 600 aaPredicted RBP3.62□□□□□ -1.83
ITGB5-213ENST00000608945 TNK2Q07912 1038 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 AP3B2Q13367 1082 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 ICAM4Q14773 271 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 GAB4Q2WGN9 574 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 PALM2Q8IXS6 379 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 GGNBP2Q9H3C7 697 aa3.62□□□□□ -1.83
ITGB5-213ENST00000608945 A0A087X1B8 175 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 A6NHS1 94 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 PROB1E7EW31 1015 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 DLX2Q07687 328 aaPredicted RBP3.61□□□□□ -1.83
ITGB5-213ENST00000608945 R3HDM1Q15032 1099 aaKnown RBP3.61□□□□□ -1.83
ITGB5-213ENST00000608945 PAPD7Q5XG87 772 aaKnown RBP3.61□□□□□ -1.83
ITGB5-213ENST00000608945 ZNF526Q8TF50 670 aaPredicted RBP3.61□□□□□ -1.83
ITGB5-213ENST00000608945 PMEPA1Q969W9 287 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 CDK5RAP1Q96SZ6 601 aaKnown RBP3.61□□□□□ -1.83
ITGB5-213ENST00000608945 ZNF341Q9BYN7 854 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 VRTNQ9H8Y1 702 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 CD248Q9HCU0 757 aa3.61□□□□□ -1.83
ITGB5-213ENST00000608945 ZFR2Q9UPR6 939 aaKnown RBP3.61□□□□□ -1.83
ITGB5-213ENST00000608945 SH3D21A4FU49 640 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 ARID3CA6NKF2 412 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 RFX1P22670 979 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 GJA9P57773 515 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 ERVK-24P63145 666 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 ZC3H12AQ5D1E8 599 aaKnown RBP3.6□□□□□ -1.83
ITGB5-213ENST00000608945 C16orf46Q6P387 395 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 LIMS2Q7Z4I7 341 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 DDX54Q8TDD1 881 aaKnown RBP3.6□□□□□ -1.83
ITGB5-213ENST00000608945 FNIP1Q8TF40 1166 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 TRIM8Q9BZR9 551 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 SUSD2Q9UGT4 822 aa3.6□□□□□ -1.83
ITGB5-213ENST00000608945 FAM196BA6NMK8 535 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 CBX7O95931 251 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 SPDYAQ5MJ70 313 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 ARMCX6Q7L4S7 300 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 SAPCD2Q86UD0 394 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 CCNJLQ8IV13 435 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 KRT82Q9NSB4 513 aa3.59□□□□□ -1.83
ITGB5-213ENST00000608945 TPX2Q9ULW0 747 aaKnown RBP3.59□□□□□ -1.83
ITGB5-213ENST00000608945 USP17L15C9J2P7 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L10C9JJH3 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L13C9JLJ4 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L12C9JPN9 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L11C9JVI0 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L21D6R901 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L18D6R9N7 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L22D6RA61 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L17D6RBQ6 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L19D6RCP7 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L20D6RJB6 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 CHRNEQ04844 493 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 EGR3Q06889 387 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 USP17L24Q0WX57 530 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 CFAP70Q5T0N1 1121 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 CCDC82Q8N4S0 544 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 TCF12Q99081 682 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 TIMELESSQ9UNS1 1208 aa3.58□□□□□ -1.84
ITGB5-213ENST00000608945 CYSRT1A8MQ03 144 aa3.57□□□□□ -1.84
ITGB5-213ENST00000608945 ABHD18Q0P651 414 aa3.57□□□□□ -1.84
ITGB5-213ENST00000608945 KANK4Q5T7N3 995 aaPredicted RBP3.57□□□□□ -1.84
ITGB5-213ENST00000608945 SPPL2CQ8IUH8 684 aa3.57□□□□□ -1.84
ITGB5-213ENST00000608945 ANKMY2Q8IV38 441 aa3.57□□□□□ -1.84
ITGB5-213ENST00000608945 FAM200AQ8TCP9 573 aa3.57□□□□□ -1.84
ITGB5-213ENST00000608945 PBXIP1Q96AQ6 731 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms