RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PHF20L1A8MW92 1017 aa19.32■□□□□ 0.68
PMF1-206ENST00000606952 GUCY1A2P33402 732 aa19.32■□□□□ 0.68
PMF1-206ENST00000606952 TROAPQ12815 778 aa19.32■□□□□ 0.68
PMF1-206ENST00000606952 RRP1BQ14684 758 aaKnown RBP19.32■□□□□ 0.68
PMF1-206ENST00000606952 CCDC83Q8IWF9 413 aa19.32■□□□□ 0.68
PMF1-206ENST00000606952 DCPSQ96C86 337 aaKnown RBP19.32■□□□□ 0.68
PMF1-206ENST00000606952 CWC22Q9HCG8 908 aaKnown RBP19.32■□□□□ 0.68
PMF1-206ENST00000606952 NYAP2Q9P242 653 aa19.32■□□□□ 0.68
PMF1-206ENST00000606952 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.32■□□□□ 0.68
PMF1-206ENST00000606952 ZBTB43O43298 467 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 CALM1P0DP23 149 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 CALM2P0DP24 149 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 CALM3P0DP25 149 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 TOP1P11387 765 aaKnown RBP19.31■□□□□ 0.68
PMF1-206ENST00000606952 CAP2P40123 477 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 ABCB5Q2M3G0 1257 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 NBPF12Q5TAG4 269 aaPredicted RBP19.31■□□□□ 0.68
PMF1-206ENST00000606952 NFXL1Q6ZNB6 911 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 SULF1Q8IWU6 871 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 SMARCC2Q8TAQ2 1214 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 MKL1Q969V6 931 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 KANSL2Q9H9L4 492 aa19.31■□□□□ 0.68
PMF1-206ENST00000606952 OTOFQ9HC10 1997 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 TTLL1O95922 423 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 SYNE3Q6ZMZ3 975 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 CATIPQ7Z7H3 387 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 NECAB1Q8N987 351 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 TMEM47Q9BQJ4 181 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 ZNF341Q9BYN7 854 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 KAT14Q9H8E8 782 aa19.3■□□□□ 0.68
PMF1-206ENST00000606952 FAM217BQ9NTX9 383 aaPredicted RBP19.3■□□□□ 0.68
PMF1-206ENST00000606952 DHX16O60231 1041 aaKnown RBP19.29■□□□□ 0.68
PMF1-206ENST00000606952 VEGFAP15692 232 aaPredicted RBP19.29■□□□□ 0.68
PMF1-206ENST00000606952 METAP2P50579 478 aaKnown RBP eCLIP19.29■□□□□ 0.68
PMF1-206ENST00000606952 SUPT20HL1Q3ZLR7 823 aa19.29■□□□□ 0.68
PMF1-206ENST00000606952 PNMA1Q8ND90 353 aa19.29■□□□□ 0.68
PMF1-206ENST00000606952 CABP5Q9NP86 173 aa19.29■□□□□ 0.68
PMF1-206ENST00000606952 ZBTB21Q9ULJ3 1066 aa19.29■□□□□ 0.68
PMF1-206ENST00000606952 CIZ1Q9ULV3 898 aaPredicted RBP19.29■□□□□ 0.68
PMF1-206ENST00000606952 SCAF8Q9UPN6 1271 aaKnown RBP19.29■□□□□ 0.68
PMF1-206ENST00000606952 PHIPQ8WWQ0 1821 aa19.29■□□□□ 0.68
PMF1-206ENST00000606952 CCDC196A0A1B0GTZ2 297 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 GOLGA8AA7E2F4 631 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 CTNND1O60716 968 aaKnown RBP19.28■□□□□ 0.68
PMF1-206ENST00000606952 CTDNEP1O95476 244 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 HSP90AA1P07900 732 aaKnown RBP19.28■□□□□ 0.68
PMF1-206ENST00000606952 JAG1P78504 1218 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 STK3Q13188 491 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 NTRK3Q16288 839 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 KRT26Q7Z3Y9 468 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 MICU3Q86XE3 530 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 NSUN7Q8NE18 718 aaKnown RBP19.28■□□□□ 0.68
PMF1-206ENST00000606952 RBM28Q9NW13 759 aaKnown RBP19.28■□□□□ 0.68
PMF1-206ENST00000606952 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
PMF1-206ENST00000606952 GDF11O95390 407 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 GH2P01242 217 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 ASNSP08243 561 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 SNHG28P0DPA3 235 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 CDC27P30260 824 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 GRM4Q14833 912 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 SEPT2Q15019 361 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 NOL9Q5SY16 702 aaKnown RBP19.27■□□□□ 0.68
PMF1-206ENST00000606952 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 SIAH1Q8IUQ4 282 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 FANCBQ8NB91 859 aa19.27■□□□□ 0.68
PMF1-206ENST00000606952 MYH6P13533 1939 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 ADM5C9JUS6 153 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 MPHOSPH10O00566 681 aaKnown RBP19.26■□□□□ 0.67
PMF1-206ENST00000606952 IFNAR1P17181 557 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 CCT2P78371 535 aaKnown RBP19.26■□□□□ 0.67
PMF1-206ENST00000606952 HMGN5P82970 282 aaKnown RBP19.26■□□□□ 0.67
PMF1-206ENST00000606952 ICA1Q05084 483 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 RTN1Q16799 776 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 SHROOM1Q2M3G4 852 aaPredicted RBP19.26■□□□□ 0.67
PMF1-206ENST00000606952 CDC37L1Q7L3B6 337 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 RGS22Q8NE09 1264 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 MYL10Q9BUA6 226 aa19.26■□□□□ 0.67
PMF1-206ENST00000606952 NCOA5Q9HCD5 579 aaKnown RBP19.26■□□□□ 0.67
PMF1-206ENST00000606952 STK36Q9NRP7 1315 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 CDKL5O76039 1030 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 MAP3K11Q16584 847 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 CPLX2Q6PUV4 134 aaKnown RBP19.25■□□□□ 0.67
PMF1-206ENST00000606952 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 GMCL1P1Q8NEA9 526 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 SMC3Q9UQE7 1217 aa19.25■□□□□ 0.67
PMF1-206ENST00000606952 EEF2P13639 858 aaKnown RBP19.24■□□□□ 0.67
PMF1-206ENST00000606952 PDIA4P13667 645 aaKnown RBP19.24■□□□□ 0.67
PMF1-206ENST00000606952 RXRAP19793 462 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 KIF5BP33176 963 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 FUT2Q10981 343 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 EAPPQ56P03 285 aaPredicted RBP19.24■□□□□ 0.67
PMF1-206ENST00000606952 CLEC10AQ8IUN9 316 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.24■□□□□ 0.67
PMF1-206ENST00000606952 ZNF526Q8TF50 670 aaPredicted RBP19.24■□□□□ 0.67
PMF1-206ENST00000606952 CDCA5Q96FF9 252 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 RRAGCQ9HB90 399 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 NAP1L2Q9ULW6 460 aaPredicted RBP19.24■□□□□ 0.67
PMF1-206ENST00000606952 TMX2Q9Y320 296 aa19.24■□□□□ 0.67
PMF1-206ENST00000606952 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms