RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MMP14P50281 582 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 RASSF7Q02833 373 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 OTUD7BQ6GQQ9 843 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 ZSCAN29Q8IWY8 852 aaPredicted RBP25.07■■□□□ 1.6
USP6NL-204ENST00000606752 CMTR1Q8N1G2 835 aaKnown RBP25.07■■□□□ 1.6
USP6NL-204ENST00000606752 CCDC82Q8N4S0 544 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 AIFM3Q96NN9 605 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 DEXIO95424 95 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 SHMT1P34896 483 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 NOVP48745 357 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 SH3BP5LQ7L8J4 393 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 TMEM47Q9BQJ4 181 aa25.07■■□□□ 1.6
USP6NL-204ENST00000606752 RNF26Q9BY78 433 aaPredicted RBP25.07■■□□□ 1.6
USP6NL-204ENST00000606752 PLIN4Q96Q06 1357 aa25.06■■□□□ 1.6
USP6NL-204ENST00000606752 KIF5BP33176 963 aa25.06■■□□□ 1.6
USP6NL-204ENST00000606752 FUT2Q10981 343 aa25.06■■□□□ 1.6
USP6NL-204ENST00000606752 TMTC3Q6ZXV5 915 aa25.06■■□□□ 1.6
USP6NL-204ENST00000606752 FOXP4Q8IVH2 680 aaPredicted RBP25.06■■□□□ 1.6
USP6NL-204ENST00000606752 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.06■■□□□ 1.6
USP6NL-204ENST00000606752 FIBPO43427 364 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 CEP95Q96GE4 821 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 GJB4Q9NTQ9 266 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 ZNF70Q9UC06 446 aaPredicted RBP25.05■■□□□ 1.6
USP6NL-204ENST00000606752 PLEKHA8P1O95397 391 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 AKR1B1P15121 316 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 RPS12P25398 132 aaKnown RBP25.05■■□□□ 1.6
USP6NL-204ENST00000606752 AKAP17AQ02040 695 aaKnown RBP25.05■■□□□ 1.6
USP6NL-204ENST00000606752 TRIM29Q14134 588 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 CCDC17Q96LX7 622 aa25.05■■□□□ 1.6
USP6NL-204ENST00000606752 ATRNL1Q5VV63 1379 aa25.04■■□□□ 1.6
USP6NL-204ENST00000606752 FZD9O00144 591 aa25.04■■□□□ 1.6
USP6NL-204ENST00000606752 PRPF3O43395 683 aaKnown RBP25.04■■□□□ 1.6
USP6NL-204ENST00000606752 GUCY1A2P33402 732 aa25.04■■□□□ 1.6
USP6NL-204ENST00000606752 PRELPP51888 382 aa25.04■■□□□ 1.6
USP6NL-204ENST00000606752 KRT40Q6A162 431 aa25.04■■□□□ 1.6
USP6NL-204ENST00000606752 SCAND2PQ9GZW5 306 aaPredicted RBP25.04■■□□□ 1.6
USP6NL-204ENST00000606752 TCHHQ07283 1943 aa25.03■■□□□ 1.6
USP6NL-204ENST00000606752 UBE2Q2LH0YL09 131 aa25.03■■□□□ 1.6
USP6NL-204ENST00000606752 TOP1P11387 765 aaKnown RBP25.03■■□□□ 1.6
USP6NL-204ENST00000606752 EIF6P56537 245 aaKnown RBP25.03■■□□□ 1.6
USP6NL-204ENST00000606752 SPDYE2Q495Y8 402 aa25.03■■□□□ 1.6
USP6NL-204ENST00000606752 METTL16Q86W50 562 aaKnown RBP25.03■■□□□ 1.6
USP6NL-204ENST00000606752 FHDC1Q9C0D6 1143 aaPredicted RBP25.03■■□□□ 1.6
USP6NL-204ENST00000606752 MTMR4Q9NYA4 1195 aa25.03■■□□□ 1.6
USP6NL-204ENST00000606752 COL2A1P02458 1487 aaPredicted RBP25.03■■□□□ 1.6
USP6NL-204ENST00000606752 IGKV6D-41A0A0C4DH26 115 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 CLRN2A0PK11 232 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 MBD3O95983 291 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 GRM4Q14833 912 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 FKBP1CQ5VVH2 108 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 ATL3Q6DD88 541 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 ZBED3Q96IU2 234 aaPredicted RBP25.02■■□□□ 1.6
USP6NL-204ENST00000606752 DNAJC18Q9H819 358 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 TFIP11Q9UBB9 837 aaKnown RBP25.02■■□□□ 1.6
USP6NL-204ENST00000606752 ARFGEF1Q9Y6D6 1849 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 GNAQP50148 359 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 SRBD1Q8N5C6 995 aaKnown RBP25.02■■□□□ 1.6
USP6NL-204ENST00000606752 GPT2Q8TD30 523 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 TRIM34Q9BYJ4 488 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 GZF1Q9H116 711 aaPredicted RBP25.02■■□□□ 1.6
USP6NL-204ENST00000606752 CFAP45Q9UL16 551 aa25.02■■□□□ 1.6
USP6NL-204ENST00000606752 V9GY48 417 aaPredicted RBP25.02■■□□□ 1.6
USP6NL-204ENST00000606752 TCP10L2B9ZVM9 353 aa25.01■■□□□ 1.59
USP6NL-204ENST00000606752 MYO1BO43795 1136 aa25.01■■□□□ 1.59
USP6NL-204ENST00000606752 GSE1Q14687 1217 aa25.01■■□□□ 1.59
USP6NL-204ENST00000606752 BRAPQ7Z569 592 aa25.01■■□□□ 1.59
USP6NL-204ENST00000606752 ZNF280AP59817 542 aaPredicted RBP25■■□□□ 1.59
USP6NL-204ENST00000606752 KIF23Q02241 960 aaPredicted RBP25■■□□□ 1.59
USP6NL-204ENST00000606752 FAM151AQ8WW52 585 aa25■■□□□ 1.59
USP6NL-204ENST00000606752 MYOZ2Q9NPC6 264 aa25■■□□□ 1.59
USP6NL-204ENST00000606752 GADD45BO75293 160 aaPredicted RBP25■■□□□ 1.59
USP6NL-204ENST00000606752 UBE2HP62256 183 aa25■■□□□ 1.59
USP6NL-204ENST00000606752 TATDN1Q6P1N9 297 aa25■■□□□ 1.59
USP6NL-204ENST00000606752 DPF2Q92785 391 aa25■■□□□ 1.59
USP6NL-204ENST00000606752 ZNF396Q96N95 335 aaPredicted RBP25■■□□□ 1.59
USP6NL-204ENST00000606752 MAD2L2Q9UI95 211 aa25■■□□□ 1.59
USP6NL-204ENST00000606752 ELP1O95163 1332 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 WNT10BO00744 389 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 SLURP2P0DP57 97 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 PKN1Q16512 942 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 CERKLQ49MI3 558 aaPredicted RBP24.99■■□□□ 1.59
USP6NL-204ENST00000606752 PPP4R3BQ5MIZ7 849 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 CSRNP1Q96S65 589 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 CNTNAP5Q8WYK1 1306 aa24.99■■□□□ 1.59
USP6NL-204ENST00000606752 TTLL1O95922 423 aa24.98■■□□□ 1.59
USP6NL-204ENST00000606752 ARHGAP27Q6ZUM4 889 aa24.98■■□□□ 1.59
USP6NL-204ENST00000606752 SPATA32Q96LK8 384 aa24.98■■□□□ 1.59
USP6NL-204ENST00000606752 PALM3A6NDB9 673 aaPredicted RBP24.98■■□□□ 1.59
USP6NL-204ENST00000606752 MPHOSPH10O00566 681 aaKnown RBP24.98■■□□□ 1.59
USP6NL-204ENST00000606752 XBP1P17861 261 aa24.98■■□□□ 1.59
USP6NL-204ENST00000606752 STAG2Q8N3U4 1231 aa24.98■■□□□ 1.59
USP6NL-204ENST00000606752 LEO1Q8WVC0 666 aaPredicted RBP24.98■■□□□ 1.59
USP6NL-204ENST00000606752 VEZTQ9HBM0 779 aa24.98■■□□□ 1.59
USP6NL-204ENST00000606752 RBM27Q9P2N5 1060 aaKnown RBP24.98■■□□□ 1.59
USP6NL-204ENST00000606752 FAM196BA6NMK8 535 aa24.97■■□□□ 1.59
USP6NL-204ENST00000606752 KIF28PB7ZC32 967 aa24.97■■□□□ 1.59
USP6NL-204ENST00000606752 GMPSP49915 693 aaPredicted RBP24.97■■□□□ 1.59
USP6NL-204ENST00000606752 FAM83AQ86UY5 434 aa24.97■■□□□ 1.59
USP6NL-204ENST00000606752 LZTS2Q9BRK4 669 aa24.97■■□□□ 1.59
USP6NL-204ENST00000606752 HERC5Q9UII4 1024 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms