RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 USP17L18D6R9N7 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L22D6RA61 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L17D6RBQ6 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L19D6RCP7 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L20D6RJB6 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 EVI5O60447 810 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 SHMT1P34896 483 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP14P54578 494 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 USP17L24Q0WX57 530 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.49■■■□□ 2.31
SNX5-219ENST00000606602 PORCNQ9H237 461 aa29.49■■■□□ 2.31
SNX5-219ENST00000606602 RBM27Q9P2N5 1060 aaKnown RBP29.49■■■□□ 2.31
SNX5-219ENST00000606602 ZNF532Q9HCE3 1301 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 MYH1P12882 1939 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 POTEEQ6S8J3 1075 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 NECAB2Q7Z6G3 386 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 ACER1Q8TDN7 264 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 KIAA1683Q9H0B3 1180 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 MCM9Q9NXL9 1143 aa29.48■■■□□ 2.31
SNX5-219ENST00000606602 RAB11FIP3O75154 756 aa29.47■■■□□ 2.31
SNX5-219ENST00000606602 XRCC5P13010 732 aaKnown RBP29.47■■■□□ 2.31
SNX5-219ENST00000606602 DIS3LQ8TF46 1054 aaKnown RBP29.47■■■□□ 2.31
SNX5-219ENST00000606602 CWC22Q9HCG8 908 aaKnown RBP29.47■■■□□ 2.31
SNX5-219ENST00000606602 GPR142Q7Z601 462 aa29.46■■■□□ 2.31
SNX5-219ENST00000606602 PLEKHH3Q7Z736 793 aa29.46■■■□□ 2.31
SNX5-219ENST00000606602 ANKLE1Q8NAG6 615 aa29.46■■■□□ 2.31
SNX5-219ENST00000606602 EDC3Q96F86 508 aaKnown RBP29.46■■■□□ 2.31
SNX5-219ENST00000606602 TCRBV5S4A2TA0A5A2 114 aa29.45■■■□□ 2.31
SNX5-219ENST00000606602 PRKAR2AP13861 404 aaKnown RBP29.45■■■□□ 2.31
SNX5-219ENST00000606602 VCAM1P19320 739 aa29.45■■■□□ 2.31
SNX5-219ENST00000606602 CATSPERGQ6ZRH7 1159 aa29.45■■■□□ 2.31
SNX5-219ENST00000606602 TRMT44Q8IYL2 757 aaKnown RBP29.45■■■□□ 2.31
SNX5-219ENST00000606602 CHMP4BQ9H444 224 aaKnown RBP29.45■■■□□ 2.31
SNX5-219ENST00000606602 RABGAP1Q9Y3P9 1069 aa29.45■■■□□ 2.31
SNX5-219ENST00000606602 ZKSCAN1P17029 563 aaPredicted RBP29.44■■■□□ 2.3
SNX5-219ENST00000606602 RGS2P41220 211 aa29.44■■■□□ 2.3
SNX5-219ENST00000606602 GABPAQ06546 454 aa29.44■■■□□ 2.3
SNX5-219ENST00000606602 MAP3K21Q5TCX8 1036 aa29.44■■■□□ 2.3
SNX5-219ENST00000606602 LCORLQ8N3X6 602 aa29.44■■■□□ 2.3
SNX5-219ENST00000606602 SDR42E1Q8WUS8 393 aa29.44■■■□□ 2.3
SNX5-219ENST00000606602 USP6NLQ92738 828 aa29.44■■■□□ 2.3
SNX5-219ENST00000606602 MPHOSPH10O00566 681 aaKnown RBP29.43■■■□□ 2.3
SNX5-219ENST00000606602 GUCY1A2P33402 732 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 EVX2Q03828 476 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 SEPT2Q15019 361 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 MORN1Q5T089 497 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 BOLA2Q9H3K6 86 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 PAG1Q9NWQ8 432 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 RCAN3Q9UKA8 241 aa29.43■■■□□ 2.3
SNX5-219ENST00000606602 CNMDO75829 334 aa29.42■■■□□ 2.3
SNX5-219ENST00000606602 CCNA1P78396 465 aa29.42■■■□□ 2.3
SNX5-219ENST00000606602 ARMT1Q9H993 441 aa29.42■■■□□ 2.3
SNX5-219ENST00000606602 DCP1AQ9NPI6 582 aaPredicted RBP29.42■■■□□ 2.3
SNX5-219ENST00000606602 PLXNB2O15031 1838 aa29.42■■■□□ 2.3
SNX5-219ENST00000606602 TRIOBPQ9H2D6 2365 aa29.41■■■□□ 2.3
SNX5-219ENST00000606602 NBPF3Q9H094 633 aa29.41■■■□□ 2.3
SNX5-219ENST00000606602 PRO3102Q9H379 93 aa29.41■■■□□ 2.3
SNX5-219ENST00000606602 RPAP3Q9H6T3 665 aaPredicted RBP29.41■■■□□ 2.3
SNX5-219ENST00000606602 OGDHLQ9ULD0 1010 aa29.41■■■□□ 2.3
SNX5-219ENST00000606602 GLRX3O76003 335 aaKnown RBP29.4■■■□□ 2.3
SNX5-219ENST00000606602 CYP2D6P10635 497 aa29.4■■■□□ 2.3
SNX5-219ENST00000606602 CACNB2Q08289 660 aaPredicted RBP29.4■■■□□ 2.3
SNX5-219ENST00000606602 CCL14Q16627 93 aa29.4■■■□□ 2.3
SNX5-219ENST00000606602 WDR78Q5VTH9 848 aa29.4■■■□□ 2.3
SNX5-219ENST00000606602 APBA2Q99767 749 aa29.4■■■□□ 2.3
SNX5-219ENST00000606602 ATP5JP18859 108 aa29.39■■■□□ 2.3
SNX5-219ENST00000606602 MAP2K5Q13163 448 aa29.39■■■□□ 2.3
SNX5-219ENST00000606602 SLFNL1Q499Z3 407 aa29.39■■■□□ 2.3
SNX5-219ENST00000606602 DDX60LQ5H9U9 1706 aaKnown RBP29.39■■■□□ 2.3
SNX5-219ENST00000606602 RANBP2P49792 3224 aaKnown RBP29.39■■■□□ 2.29
SNX5-219ENST00000606602 ADD2P35612 726 aa29.38■■■□□ 2.29
SNX5-219ENST00000606602 MNX1P50219 401 aaPredicted RBP29.38■■■□□ 2.29
SNX5-219ENST00000606602 LBX2Q6XYB7 198 aa29.38■■■□□ 2.29
SNX5-219ENST00000606602 SLC44A5Q8NCS7 719 aa29.38■■■□□ 2.29
SNX5-219ENST00000606602 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.38■■■□□ 2.29
SNX5-219ENST00000606602 C11orf49Q9H6J7 331 aa29.38■■■□□ 2.29
SNX5-219ENST00000606602 BTBD7Q9P203 1132 aa29.38■■■□□ 2.29
SNX5-219ENST00000606602 A0A1W2PRG0 241 aa29.37■■■□□ 2.29
SNX5-219ENST00000606602 PRKAB2O43741 272 aa29.37■■■□□ 2.29
SNX5-219ENST00000606602 MBD4O95243 580 aa29.37■■■□□ 2.29
SNX5-219ENST00000606602 C7orf61Q8IZ16 206 aa29.37■■■□□ 2.29
SNX5-219ENST00000606602 HAUS7Q99871 368 aa29.37■■■□□ 2.29
SNX5-219ENST00000606602 SWAP70Q9UH65 585 aa29.37■■■□□ 2.29
SNX5-219ENST00000606602 NAV1Q8NEY1 1877 aa29.36■■■□□ 2.29
SNX5-219ENST00000606602 SPDYE16A6NNV3 312 aaPredicted RBP29.36■■■□□ 2.29
SNX5-219ENST00000606602 DYNLL2Q96FJ2 89 aa29.36■■■□□ 2.29
SNX5-219ENST00000606602 SLC15A5A6NIM6 579 aa29.35■■■□□ 2.29
SNX5-219ENST00000606602 PTPREP23469 700 aa29.35■■■□□ 2.29
SNX5-219ENST00000606602 CCND3P30281 292 aaPredicted RBP29.35■■■□□ 2.29
SNX5-219ENST00000606602 TMEM179Q6ZVK1 233 aa29.35■■■□□ 2.29
SNX5-219ENST00000606602 ATP8A2Q9NTI2 1148 aa29.35■■■□□ 2.29
SNX5-219ENST00000606602 STAP2Q9UGK3 403 aa29.35■■■□□ 2.29
SNX5-219ENST00000606602 IVNS1ABPQ9Y6Y0 642 aa29.35■■■□□ 2.29
SNX5-219ENST00000606602 C20orf194Q5TEA3 1177 aa29.34■■■□□ 2.29
SNX5-219ENST00000606602 LRRCC1Q9C099 1032 aa29.34■■■□□ 2.29
SNX5-219ENST00000606602 TANGO6Q9C0B7 1094 aa29.34■■■□□ 2.29
SNX5-219ENST00000606602 COG2Q14746 738 aa29.33■■■□□ 2.29
SNX5-219ENST00000606602 HOXC10Q9NYD6 342 aa29.33■■■□□ 2.29
SNX5-219ENST00000606602 CHGBP05060 677 aa29.32■■■□□ 2.28
SNX5-219ENST00000606602 MFSD14CQ5VZR4 134 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms