RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 USP17L20D6RJB6 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 SRGAP3O43295 1099 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 PTPREP23469 700 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 RTP1P59025 263 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 ATP2B2Q01814 1243 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 USP17L24Q0WX57 530 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 GRB14Q14449 540 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 NAA16Q6N069 864 aaPredicted RBP16.37■□□□□ 0.21
CTSA-212ENST00000606394 ARRDC4Q8NCT1 418 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 AATFQ9NY61 560 aaKnown RBP eCLIP16.37■□□□□ 0.21
CTSA-212ENST00000606394 IVNS1ABPQ9Y6Y0 642 aa16.37■□□□□ 0.21
CTSA-212ENST00000606394 TMEM265A0A087WTH1 108 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 GDF11O95390 407 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 GNAI3P08754 354 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
CTSA-212ENST00000606394 MCAMP43121 646 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 ATN1P54259 1190 aaPredicted RBP16.36■□□□□ 0.21
CTSA-212ENST00000606394 USP14P54578 494 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 TGFBRAP1Q8WUH2 860 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 MEIS3Q99687 375 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 FLRT1Q9NZU1 646 aa16.36■□□□□ 0.21
CTSA-212ENST00000606394 FOCADQ5VW36 1801 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 CNMDO75829 334 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 IGHA2P01877 340 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 CNGA1P29973 690 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 SHHQ15465 462 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 MAPKAPK5Q8IW41 473 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 RLFQ13129 1914 aa16.35■□□□□ 0.21
CTSA-212ENST00000606394 CYBAP13498 195 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 SNX17Q15036 470 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 WDR78Q5VTH9 848 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 OLFML2BQ68BL8 750 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 SLC39A5Q6ZMH5 540 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 CATSPERGQ6ZRH7 1159 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 FEZ1Q99689 392 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 KIAA1683Q9H0B3 1180 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 NOB1Q9ULX3 412 aaKnown RBP16.34■□□□□ 0.21
CTSA-212ENST00000606394 ATP11BQ9Y2G3 1177 aa16.34■□□□□ 0.21
CTSA-212ENST00000606394 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
CTSA-212ENST00000606394 NCOR1O75376 2440 aa16.33■□□□□ 0.2
CTSA-212ENST00000606394 KBTBD13C9JR72 458 aa16.33■□□□□ 0.2
CTSA-212ENST00000606394 STRNO43815 780 aa16.33■□□□□ 0.2
CTSA-212ENST00000606394 GH2P01242 217 aa16.33■□□□□ 0.2
CTSA-212ENST00000606394 CYP2C19P33261 490 aa16.33■□□□□ 0.2
CTSA-212ENST00000606394 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.2
CTSA-212ENST00000606394 TATDN1Q6P1N9 297 aa16.33■□□□□ 0.2
CTSA-212ENST00000606394 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.33■□□□□ 0.2
CTSA-212ENST00000606394 FOSL2P15408 326 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 VCAM1P19320 739 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 C9orf50Q5SZB4 431 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 TRPV1Q8NER1 839 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 NPLOC4Q8TAT6 608 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 EHD4Q9H223 541 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 TTYH1Q9H313 450 aaPredicted RBP16.32■□□□□ 0.2
CTSA-212ENST00000606394 PPP4R2Q9NY27 417 aa16.32■□□□□ 0.2
CTSA-212ENST00000606394 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 BDP1A6H8Y1 2624 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 SEPT4O43236 478 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 G3BP1Q13283 466 aaKnown RBP eCLIP16.31■□□□□ 0.2
CTSA-212ENST00000606394 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
CTSA-212ENST00000606394 MYLIPQ8WY64 445 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 ARHGAP45Q92619 1136 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 BADQ92934 168 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 ZNF512BQ96KM6 892 aaPredicted RBP16.31■□□□□ 0.2
CTSA-212ENST00000606394 GPR108Q9NPR9 543 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 PRDM5Q9NQX1 630 aaPredicted RBP16.31■□□□□ 0.2
CTSA-212ENST00000606394 PDLIM7Q9NR12 457 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 BTBD7Q9P203 1132 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 NDUFB9Q9Y6M9 179 aa16.31■□□□□ 0.2
CTSA-212ENST00000606394 IRX6P78412 446 aaPredicted RBP16.3■□□□□ 0.2
CTSA-212ENST00000606394 CCDC158Q5M9N0 1113 aa16.3■□□□□ 0.2
CTSA-212ENST00000606394 TMED8Q6PL24 325 aaPredicted RBP16.3■□□□□ 0.2
CTSA-212ENST00000606394 ADGRA1Q86SQ6 560 aa16.3■□□□□ 0.2
CTSA-212ENST00000606394 DPP9Q86TI2 863 aa16.3■□□□□ 0.2
CTSA-212ENST00000606394 SLC5A4Q9NY91 659 aa16.3■□□□□ 0.2
CTSA-212ENST00000606394 SERPINB13Q9UIV8 391 aa16.3■□□□□ 0.2
CTSA-212ENST00000606394 SPDYE16A6NNV3 312 aaPredicted RBP16.29■□□□□ 0.2
CTSA-212ENST00000606394 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
CTSA-212ENST00000606394 TRIM60Q495X7 471 aa16.29■□□□□ 0.2
CTSA-212ENST00000606394 CERKLQ49MI3 558 aaPredicted RBP16.29■□□□□ 0.2
CTSA-212ENST00000606394 TTC39AQ5SRH9 613 aa16.29■□□□□ 0.2
CTSA-212ENST00000606394 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
CTSA-212ENST00000606394 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
CTSA-212ENST00000606394 HOXC10Q9NYD6 342 aa16.29■□□□□ 0.2
CTSA-212ENST00000606394 SAP30BPQ9UHR5 308 aaKnown RBP16.29■□□□□ 0.2
CTSA-212ENST00000606394 TACC3Q9Y6A5 838 aa16.29■□□□□ 0.2
CTSA-212ENST00000606394 CYP2E1P05181 493 aaPredicted RBP16.28■□□□□ 0.2
CTSA-212ENST00000606394 ADORA2AP29274 412 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 RAB3GAP1Q15042 981 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 ABCB5Q2M3G0 1257 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 ABRAQ8N0Z2 381 aa16.28■□□□□ 0.2
CTSA-212ENST00000606394 RPAP3Q9H6T3 665 aaPredicted RBP16.28■□□□□ 0.2
CTSA-212ENST00000606394 CABP5Q9NP86 173 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms