RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 SRBD1Q8N5C6 995 aaKnown RBP22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 WASF1Q92558 559 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 USP28Q96RU2 1077 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 TMEM47Q9BQJ4 181 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 TAOK3Q9H2K8 898 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 KCNJ14Q9UNX9 436 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 CD2APQ9Y5K6 639 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 FOCADQ5VW36 1801 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 NT5C2P49902 561 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 FUT2Q10981 343 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 PIBF1Q8WXW3 757 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 ANKS1AQ92625 1134 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 CEP95Q96GE4 821 aa22.26■■□□□ 1.15
TUBB4B-202ENST00000604929 DDTLA6NHG4 134 aaPredicted RBP22.25■■□□□ 1.15
TUBB4B-202ENST00000604929 HLA-DOAP06340 250 aa22.25■■□□□ 1.15
TUBB4B-202ENST00000604929 GNL2Q13823 731 aaKnown RBP22.25■■□□□ 1.15
TUBB4B-202ENST00000604929 CCDC178Q5BJE1 867 aa22.25■■□□□ 1.15
TUBB4B-202ENST00000604929 VPS33BQ9H267 617 aa22.25■■□□□ 1.15
TUBB4B-202ENST00000604929 ZNF646O15015 1829 aaPredicted RBP22.25■■□□□ 1.15
TUBB4B-202ENST00000604929 TMTC3Q6ZXV5 915 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 GAS2L3Q86XJ1 694 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 ZNF396Q96N95 335 aaPredicted RBP22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 IDI2Q9BXS1 227 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 RNF26Q9BY78 433 aaPredicted RBP22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 BAZ2BQ9UIF8 2168 aaKnown RBP22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 FAM196BA6NMK8 535 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 AKR1B1P15121 316 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 CXCL9Q07325 125 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 STAG2Q8N3U4 1231 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 OGFOD1Q8N543 542 aa22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.24■■□□□ 1.15
TUBB4B-202ENST00000604929 GOLGA6L4A6NEF3 574 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 GOLGA6L3A6NEY3 463 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 NFKBIEO00221 500 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 PKN1Q16512 942 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 SH3BP5LQ7L8J4 393 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 NLGN2Q8NFZ4 835 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 JDP2Q8WYK2 163 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 GMLQ99445 158 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 ELP1O95163 1332 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 PRPF3O43395 683 aaKnown RBP22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 EIF6P56537 245 aaKnown RBP22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 RASGRP2Q7LDG7 609 aa22.23■■□□□ 1.15
TUBB4B-202ENST00000604929 MYO3BQ8WXR4 1341 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 CLRN2A0PK11 232 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 KIF5BP33176 963 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 SHMT1P34896 483 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 MYSM1Q5VVJ2 828 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 BRAPQ7Z569 592 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 PGBD1Q96JS3 809 aa22.22■■□□□ 1.15
TUBB4B-202ENST00000604929 SYCE3A1L190 88 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 BTBD18B2RXH4 712 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 GOLGA8HP0CJ92 632 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 CLEC10AQ8IUN9 316 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 DHX36Q9H2U1 1008 aaKnown RBP22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 VPS54Q9P1Q0 977 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 SWAP70Q9UH65 585 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 HDAC9Q9UKV0 1011 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 CLIC4Q9Y696 253 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 MPHOSPH10O00566 681 aaKnown RBP22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 MMP1P03956 469 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 DLGAP5Q15398 846 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 PI4KBQ9UBF8 816 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 MAD2L2Q9UI95 211 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 RCOR1Q9UKL0 485 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 ECM29Q5VYK3 1845 aa22.21■■□□□ 1.15
TUBB4B-202ENST00000604929 SPDYE2BA6NHP3 402 aa22.2■■□□□ 1.14
TUBB4B-202ENST00000604929 TCP10L2B9ZVM9 353 aa22.2■■□□□ 1.14
TUBB4B-202ENST00000604929 SPDYE6P0CI01 402 aa22.2■■□□□ 1.14
TUBB4B-202ENST00000604929 DNAJC18Q9H819 358 aa22.2■■□□□ 1.14
TUBB4B-202ENST00000604929 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 ATL3Q6DD88 541 aa22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 DIS3L2Q8IYB7 885 aaKnown RBP22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 RGS22Q8NE09 1264 aa22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 SHISA4Q96DD7 197 aa22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 MTMR4Q9NYA4 1195 aa22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 CNTNAP5Q8WYK1 1306 aa22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 U2AF2P26368 475 aaKnown RBP eCLIP22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 GRM4Q14833 912 aa22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 SAFBQ15424 915 aaKnown RBP eCLIP22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 SYAP1Q96A49 352 aaPredicted RBP22.19■■□□□ 1.14
TUBB4B-202ENST00000604929 FSD2A1L4K1 749 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 TOP1P11387 765 aaKnown RBP22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 LIG1P18858 919 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 RASSF7Q02833 373 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 CIAPIN1Q6FI81 312 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 USP17L2Q6R6M4 530 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 NR5A1Q13285 461 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 OXER1Q8TDS5 423 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 TRIM34Q9BYJ4 488 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 EHD4Q9H223 541 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 CPVLQ9H3G5 476 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 RTEL1Q9NZ71 1219 aa22.18■■□□□ 1.14
TUBB4B-202ENST00000604929 SHTN1A0MZ66 631 aa22.17■■□□□ 1.14
TUBB4B-202ENST00000604929 XBP1P17861 261 aa22.17■■□□□ 1.14
TUBB4B-202ENST00000604929 ME1P48163 572 aa22.17■■□□□ 1.14
TUBB4B-202ENST00000604929 ZNF445P59923 1031 aa22.17■■□□□ 1.14
TUBB4B-202ENST00000604929 ATP2B2Q01814 1243 aa22.17■■□□□ 1.14
TUBB4B-202ENST00000604929 SHROOM1Q2M3G4 852 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms