RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 CEP131Q9UPN4 1083 aa8.42□□□□□ -1.06
SH3D19-213ENST00000604922 UPK3BL1B0FP48 263 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 UPK3BL2E5RIL1 263 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 FUT4P22083 530 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 IKZF1Q13422 519 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 PI4K2BQ8TCG2 481 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 CYB5D2Q8WUJ1 264 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 LRRC3Q9BY71 257 aa8.41□□□□□ -1.06
SH3D19-213ENST00000604922 POLR3KQ9Y2Y1 108 aaPredicted RBP8.41□□□□□ -1.06
SH3D19-213ENST00000604922 ABCC9O60706 1549 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 PRR33A8MZF0 331 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 CD96P40200 585 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 TNNI2P48788 182 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 CDKAL1Q5VV42 579 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 ADAMTS1Q9UHI8 967 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 CAPN6Q9Y6Q1 641 aa8.4□□□□□ -1.06
SH3D19-213ENST00000604922 VAMP1P23763 118 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 APOBRQ0VD83 1088 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 LDLRAD1Q5T700 205 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 WFDC3Q8IUB2 231 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 RNF34Q969K3 372 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 CCDC74BQ96LY2 380 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 BRMS1Q9HCU9 246 aa8.39□□□□□ -1.07
SH3D19-213ENST00000604922 PITPNM2Q9BZ72 1349 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 PAX4O43316 350 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 ZNF792Q3KQV3 632 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 USP48Q86UV5 1035 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 KIAA0825Q8IV33 1275 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 PHACTR4Q8IZ21 702 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 DNAJB8Q8NHS0 232 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 PIWIL2Q8TC59 973 aaKnown RBP8.38□□□□□ -1.07
SH3D19-213ENST00000604922 HSPA12BQ96MM6 686 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 SPON2Q9BUD6 331 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 KRTAP4-11Q9BYQ6 195 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 PCDHB14Q9Y5E9 798 aa8.38□□□□□ -1.07
SH3D19-213ENST00000604922 CHURC1-FNTBB4DL54 471 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 H3BS24 57 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 SCAMP3O14828 347 aaKnown RBP8.37□□□□□ -1.07
SH3D19-213ENST00000604922 MCM4P33991 863 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 FANCCQ00597 558 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 SEZ6Q53EL9 994 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 NKD1Q969G9 470 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 NT5C1AQ9BXI3 368 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 UBP1Q9NZI7 540 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 KCNH3Q9ULD8 1083 aa8.37□□□□□ -1.07
SH3D19-213ENST00000604922 BIN1O00499 593 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 ATE1O95260 518 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 ZNF165P49910 485 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 ZP2Q05996 745 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 TNK2Q07912 1038 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 SLC23A3Q6PIS1 610 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 THAP5Q7Z6K1 395 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 PPP1R13LQ8WUF5 828 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 RC3H2Q9HBD1 1191 aaKnown RBP8.36□□□□□ -1.07
SH3D19-213ENST00000604922 SEMA3GQ9NS98 782 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 ST14Q9Y5Y6 855 aa8.36□□□□□ -1.07
SH3D19-213ENST00000604922 GBP1P32455 592 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 CRKP46108 304 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 GK5Q6ZS86 529 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 REXO1Q8N1G1 1221 aaKnown RBP8.35□□□□□ -1.07
SH3D19-213ENST00000604922 RNF141Q8WVD5 230 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 UBE2FQ969M7 185 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 ATP13A1Q9HD20 1204 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 LMCD1Q9NZU5 365 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 ZSWIM5Q9P217 1185 aa8.35□□□□□ -1.07
SH3D19-213ENST00000604922 CCDC9Q9Y3X0 531 aaKnown RBP8.35□□□□□ -1.07
SH3D19-213ENST00000604922 RAG1P15918 1043 aa8.34□□□□□ -1.07
SH3D19-213ENST00000604922 JUNBP17275 347 aaPredicted RBP8.34□□□□□ -1.07
SH3D19-213ENST00000604922 BAHD1Q8TBE0 780 aaPredicted RBP8.34□□□□□ -1.07
SH3D19-213ENST00000604922 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
SH3D19-213ENST00000604922 TRIT1Q9H3H1 467 aaKnown RBP8.34□□□□□ -1.07
SH3D19-213ENST00000604922 EHMT1Q9H9B1 1298 aa8.34□□□□□ -1.07
SH3D19-213ENST00000604922 MBNL3Q9NUK0 354 aaKnown RBP8.34□□□□□ -1.07
SH3D19-213ENST00000604922 GMIPQ9P107 970 aa8.34□□□□□ -1.07
SH3D19-213ENST00000604922 SLC22A31A6NKX4 558 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 RECKO95980 971 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 RNASE1P07998 156 aaKnown RBP8.33□□□□□ -1.08
SH3D19-213ENST00000604922 LRRFIP1Q32MZ4 808 aaKnown RBP8.33□□□□□ -1.08
SH3D19-213ENST00000604922 ZNF394Q53GI3 561 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 SLITRK4Q8IW52 837 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 RGS22Q8NE09 1264 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 ASIC4Q96FT7 647 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
SH3D19-213ENST00000604922 KIF2CQ99661 725 aa8.33□□□□□ -1.08
SH3D19-213ENST00000604922 RGS13O14921 159 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 TMPRSS7Q7RTY8 843 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 ATG4DQ86TL0 474 aaPredicted RBP8.32□□□□□ -1.08
SH3D19-213ENST00000604922 Q96M66 194 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 KREMEN1Q96MU8 473 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 ASPNQ9BXN1 380 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 CARS2Q9HA77 564 aaKnown RBP8.32□□□□□ -1.08
SH3D19-213ENST00000604922 GPATCH2Q9NW75 528 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 PCDHGB7Q9Y5F8 929 aa8.32□□□□□ -1.08
SH3D19-213ENST00000604922 DNAJA2O60884 412 aa8.31□□□□□ -1.08
SH3D19-213ENST00000604922 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms