RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 AMPD2Q01433 879 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 CTDSPL2Q05D32 466 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 TCIRG1Q13488 830 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 TMTC1Q8IUR5 882 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 PLA2G12BQ9BX93 195 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 AATFQ9NY61 560 aaKnown RBP eCLIP17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 MYO1AQ9UBC5 1043 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 CASP1P29466 404 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 AFMP43652 599 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 RTN1Q16799 776 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 EPB41L4AQ9HCS5 686 aaPredicted RBP17.3■□□□□ 0.36
LYSMD4-211ENST00000604213 DPYDQ12882 1025 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 HSP90B2PQ58FF3 399 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 WDR93Q6P2C0 686 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 SMYD4Q8IYR2 804 aaPredicted RBP17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 CRACR2BQ8N4Y2 399 aaPredicted RBP17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 FAM89AQ96GI7 184 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 EPSTI1Q96J88 318 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 CABP5Q9NP86 173 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 COL18A1P39060 1754 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 RNF225M0QZC1 329 aaPredicted RBP17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 DEXIO95424 95 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 PCCAP05165 728 aaPredicted RBP17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 LRRC31Q6UY01 552 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 MED4Q9NPJ6 270 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 MKRN1Q9UHC7 482 aaKnown RBP17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 MYO6Q9UM54 1294 aa17.29■□□□□ 0.36
LYSMD4-211ENST00000604213 PATL2C9JE40 543 aaKnown RBP17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 PDE4CQ08493 712 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 IFNL3Q8IZI9 196 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 CMTR1Q8N1G2 835 aaKnown RBP17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 PLCD3Q8N3E9 789 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 CCDC82Q8N4S0 544 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 GSDMAQ96QA5 445 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 ABHD10Q9NUJ1 306 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 PHACTR2O75167 634 aa17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 TRIM28Q13263 835 aaKnown RBP17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 LIMA1Q9UHB6 759 aaKnown RBP17.28■□□□□ 0.36
LYSMD4-211ENST00000604213 ALS2Q96Q42 1657 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 BCL9LQ86UU0 1499 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 KCPQ6ZWJ8 1503 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 KRT31Q15323 416 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 AKNAD1Q5T1N1 836 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 NCAPH2Q6IBW4 605 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 CYP26C1Q6V0L0 522 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 ACBD3Q9H3P7 528 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 CNNM2Q9H8M5 875 aa17.27■□□□□ 0.36
LYSMD4-211ENST00000604213 FAM205CA6NFA0 338 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 LRRC10BA6NIK2 292 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 CDC25AP30304 524 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 CCT6AP40227 531 aaKnown RBP17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 MAGEA9P43362 315 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 AARSP49588 968 aaKnown RBP eCLIP17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 LDHAL6AQ6ZMR3 332 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 TTLL11Q8NHH1 800 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 KRT23Q9C075 422 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 NAPBQ9H115 298 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 FAM204AQ9H8W3 233 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 TRIM75PA6NK02 468 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 VGLL2Q8N8G2 317 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 SYMPKQ92797 1274 aaKnown RBP17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 SHISA4Q96DD7 197 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 VIPAS39Q9H9C1 493 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 CTNND2Q9UQB3 1225 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
LYSMD4-211ENST00000604213 EIF3CLB5ME19 914 aaKnown RBP17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 COBLO75128 1261 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 PHKA1P46020 1223 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 WTAPQ15007 396 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 ZBTB38Q8NAP3 1195 aaPredicted RBP17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 EIF3CQ99613 913 aaKnown RBP17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 ZKSCAN3Q9BRR0 538 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 N4BP3O15049 544 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 SYF2O95926 243 aaKnown RBP17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 ARID4AP29374 1257 aaPredicted RBP17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 MFSD6Q6ZSS7 791 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 TRAPPC11Q7Z392 1133 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 SYNE4Q8N205 404 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 GOLGA6L1Q8N7Z2 621 aa17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 REXO2Q9Y3B8 237 aaKnown RBP17.25■□□□□ 0.35
LYSMD4-211ENST00000604213 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 MBD4O95243 580 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 USP14P54578 494 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 CTR9Q6PD62 1173 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 CCDC148Q8NFR7 591 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 CCDC196A0A1B0GTZ2 297 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 GSG1L2A8MUP6 293 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 RNF40O75150 1001 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 PRPF6O94906 941 aaKnown RBP17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 ITGA6P23229 1130 aa17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 COPB1P53618 953 aaKnown RBP17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 EARS2Q5JPH6 523 aaKnown RBP17.24■□□□□ 0.35
LYSMD4-211ENST00000604213 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms