RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 LSG1Q9H089 658 aaKnown RBP24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 ZCCHC17Q9NP64 241 aaKnown RBP24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 PICK1Q9NRD5 415 aa24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 SNCAIPQ9Y6H5 919 aa24.73■■□□□ 1.55
GRAMD1A-214ENST00000603907 SPDYE5A6NIY4 337 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 ZNF213O14771 459 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 ASNSP08243 561 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 NT5C2P49902 561 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 PTH1RQ03431 593 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 ERO1BQ86YB8 467 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 TBC1D2Q9BYX2 928 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 ANO2Q9NQ90 1003 aa24.72■■□□□ 1.55
GRAMD1A-214ENST00000603907 EPB41L2O43491 1005 aaKnown RBP24.71■■□□□ 1.55
GRAMD1A-214ENST00000603907 TLR2O60603 784 aa24.71■■□□□ 1.55
GRAMD1A-214ENST00000603907 REC8O95072 547 aa24.71■■□□□ 1.55
GRAMD1A-214ENST00000603907 RNF41Q9H4P4 317 aaPredicted RBP24.71■■□□□ 1.55
GRAMD1A-214ENST00000603907 MKNK2Q9HBH9 465 aa24.71■■□□□ 1.55
GRAMD1A-214ENST00000603907 GNRH1P01148 92 aa24.7■■□□□ 1.54
GRAMD1A-214ENST00000603907 FGRP09769 529 aa24.7■■□□□ 1.54
GRAMD1A-214ENST00000603907 PPATQ06203 517 aa24.7■■□□□ 1.54
GRAMD1A-214ENST00000603907 SLC44A5Q8NCS7 719 aa24.7■■□□□ 1.54
GRAMD1A-214ENST00000603907 CABP5Q9NP86 173 aa24.7■■□□□ 1.54
GRAMD1A-214ENST00000603907 COLQQ9Y215 455 aaPredicted RBP24.7■■□□□ 1.54
GRAMD1A-214ENST00000603907 SMIM22K7EJ46 135 aa24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 MYCP01106 439 aaPredicted RBP24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 PRMT2P55345 433 aa24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 LACTBP83111 547 aaPredicted RBP24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 SNAPC2Q13487 334 aa24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 RRP1BQ14684 758 aaKnown RBP24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 ABCB5Q2M3G0 1257 aa24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 ZBTB21Q9ULJ3 1066 aa24.69■■□□□ 1.54
GRAMD1A-214ENST00000603907 DOCK1Q14185 1865 aa24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 PTPRAP18433 802 aa24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 ZNF444Q8N0Y2 327 aaPredicted RBP24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 SH3TC2Q8TF17 1288 aa24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 STAG1Q8WVM7 1258 aa24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 RBM8AQ9Y5S9 174 aaKnown RBP24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 ZSWIM8A7E2V4 1837 aa24.68■■□□□ 1.54
GRAMD1A-214ENST00000603907 BTBD19C9JJ37 291 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 ORC4O43929 436 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 GDF11O95390 407 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 RASA1P20936 1047 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 HAND2P61296 217 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 CTDSPL2Q05D32 466 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 PPIL2Q13356 520 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 AKNAD1Q5T1N1 836 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 TMEM179Q6ZVK1 233 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 LAMA4Q16363 1823 aa24.67■■□□□ 1.54
GRAMD1A-214ENST00000603907 USP17L5A8MUK1 530 aa24.66■■□□□ 1.54
GRAMD1A-214ENST00000603907 GH2P01242 217 aa24.66■■□□□ 1.54
GRAMD1A-214ENST00000603907 MFSD6Q6ZSS7 791 aa24.66■■□□□ 1.54
GRAMD1A-214ENST00000603907 ARHGAP39Q9C0H5 1083 aa24.66■■□□□ 1.54
GRAMD1A-214ENST00000603907 AS3MTQ9HBK9 375 aa24.66■■□□□ 1.54
GRAMD1A-214ENST00000603907 MYH8P13535 1937 aa24.66■■□□□ 1.54
GRAMD1A-214ENST00000603907 IRF6O14896 467 aa24.65■■□□□ 1.54
GRAMD1A-214ENST00000603907 STK11IPQ8N1F8 1099 aa24.65■■□□□ 1.54
GRAMD1A-214ENST00000603907 BRCA2P51587 3418 aa24.65■■□□□ 1.54
GRAMD1A-214ENST00000603907 ATAD5Q96QE3 1844 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 MPHOSPH10O00566 681 aaKnown RBP24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 CYP21A2P08686 494 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 AKR1B1P15121 316 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 NECTIN1Q15223 517 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 RNF20Q5VTR2 975 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 TBC1D10CQ8IV04 446 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 WDR18Q9BV38 432 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 NBPF3Q9H094 633 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 ZHX2Q9Y6X8 837 aa24.64■■□□□ 1.54
GRAMD1A-214ENST00000603907 H0YGN5 161 aa24.63■■□□□ 1.53
GRAMD1A-214ENST00000603907 CXCL11O14625 94 aa24.63■■□□□ 1.53
GRAMD1A-214ENST00000603907 CNNM2Q9H8M5 875 aa24.63■■□□□ 1.53
GRAMD1A-214ENST00000603907 KCNH4Q9UQ05 1017 aa24.63■■□□□ 1.53
GRAMD1A-214ENST00000603907 PLIN4Q96Q06 1357 aa24.63■■□□□ 1.53
GRAMD1A-214ENST00000603907 PRDM1O75626 825 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 JAG1P78504 1218 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 PPP4R3BQ5MIZ7 849 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 NEDD1Q8NHV4 660 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 KRT23Q9C075 422 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 AFG3L2Q9Y4W6 797 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 CEP290O15078 2479 aa24.62■■□□□ 1.53
GRAMD1A-214ENST00000603907 TSPY3P0CV98 308 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 TSPY8P0CW00 308 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 HOXD10P28358 340 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 GUCY1A2P33402 732 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 RAB3GAP1Q15042 981 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 ZNF280CQ8ND82 737 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 ESR2Q92731 530 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 KANSL2Q9H9L4 492 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 TOMM22Q9NS69 142 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 TACC3Q9Y6A5 838 aa24.61■■□□□ 1.53
GRAMD1A-214ENST00000603907 TSPY2A6NKD2 308 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 SLC27A2O14975 620 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 RANBP6O60518 1105 aaKnown RBP24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 TFAP4Q01664 338 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 TRDNQ13061 729 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 SEPT2Q15019 361 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 SHROOM1Q2M3G4 852 aaPredicted RBP24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 CREB3L3Q68CJ9 461 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 C17orf99Q6UX52 265 aa24.6■■□□□ 1.53
GRAMD1A-214ENST00000603907 NKX2-3Q8TAU0 364 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms