RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 AKAP17AQ02040 695 aaKnown RBP25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 MTMR14Q8NCE2 650 aa25.85■■□□□ 1.73
PPFIA3-211ENST00000602848 TNIP1Q15025 636 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 TMTC3Q6ZXV5 915 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 FOXP4Q8IVH2 680 aaPredicted RBP25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 PNMA1Q8ND90 353 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 GPT2Q8TD30 523 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 CCDC17Q96LX7 622 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 RBM27Q9P2N5 1060 aaKnown RBP25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 PI4KBQ9UBF8 816 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 COL4A5P29400 1685 aa25.84■■□□□ 1.73
PPFIA3-211ENST00000602848 FIBPO43427 364 aa25.83■■□□□ 1.73
PPFIA3-211ENST00000602848 FUT2Q10981 343 aa25.83■■□□□ 1.73
PPFIA3-211ENST00000602848 NFIAQ12857 509 aa25.83■■□□□ 1.73
PPFIA3-211ENST00000602848 GPR162Q16538 588 aa25.83■■□□□ 1.73
PPFIA3-211ENST00000602848 PPFIA3O75145 1194 aa25.82■■□□□ 1.72
PPFIA3-211ENST00000602848 GDPD2Q9HCC8 539 aa25.82■■□□□ 1.72
PPFIA3-211ENST00000602848 TMOD2Q9NZR1 351 aa25.82■■□□□ 1.72
PPFIA3-211ENST00000602848 FAM198AQ9UFP1 575 aa25.82■■□□□ 1.72
PPFIA3-211ENST00000602848 NFKBIEO00221 500 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 XBP1P17861 261 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 GUCY1B3Q02153 619 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 DLGAP5Q15398 846 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 KRT40Q6A162 431 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 CIAPIN1Q6FI81 312 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 ATRNL1Q5VV63 1379 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 SPDYE2BA6NHP3 402 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 SPDYE6P0CI01 402 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 TOP1P11387 765 aaKnown RBP25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 FOSBP53539 338 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 CXCL9Q07325 125 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 GRM4Q14833 912 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 SYAP1Q96A49 352 aaPredicted RBP25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 PRMT6Q96LA8 375 aaPredicted RBP25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 SPATA32Q96LK8 384 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 TMEM47Q9BQJ4 181 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 LZTS2Q9BRK4 669 aa25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 ISY1Q9ULR0 285 aaKnown RBP25.81■■□□□ 1.72
PPFIA3-211ENST00000602848 KIF23Q02241 960 aaPredicted RBP25.8■■□□□ 1.72
PPFIA3-211ENST00000602848 FKBP1CQ5VVH2 108 aa25.8■■□□□ 1.72
PPFIA3-211ENST00000602848 METTL16Q86W50 562 aaKnown RBP25.8■■□□□ 1.72
PPFIA3-211ENST00000602848 TDRD3Q9H7E2 651 aaKnown RBP25.8■■□□□ 1.72
PPFIA3-211ENST00000602848 RPS12P25398 132 aaKnown RBP25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 SAFBQ15424 915 aaKnown RBP eCLIP25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 FAM173BQ6P4H8 233 aa25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 GZF1Q9H116 711 aaPredicted RBP25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 STX8Q9UNK0 236 aa25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 PCDHAC2Q9Y5I4 1007 aa25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 MYH15Q9Y2K3 1946 aa25.79■■□□□ 1.72
PPFIA3-211ENST00000602848 IGKV6D-41A0A0C4DH26 115 aa25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 SHMT1P34896 483 aa25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 OTUD7BQ6GQQ9 843 aa25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 LEO1Q8WVC0 666 aaPredicted RBP25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 TFIP11Q9UBB9 837 aaKnown RBP25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 RCOR1Q9UKL0 485 aa25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 UTRNP46939 3433 aa25.78■■□□□ 1.72
PPFIA3-211ENST00000602848 GADD45BO75293 160 aaPredicted RBP25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 U2AF2P26368 475 aaKnown RBP eCLIP25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 AIFM3Q96NN9 605 aa25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 MTMR4Q9NYA4 1195 aa25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 SMARCA1P28370 1054 aa25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 ZFPM1Q8IX07 1006 aa25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 CEP95Q96GE4 821 aa25.77■■□□□ 1.72
PPFIA3-211ENST00000602848 PLEKHA8P1O95397 391 aa25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 CAVIN1Q6NZI2 390 aaKnown RBP25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 ZSCAN29Q8IWY8 852 aaPredicted RBP25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 FAM177A1Q8N128 213 aaPredicted RBP25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 SRBD1Q8N5C6 995 aaKnown RBP25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 TRIM34Q9BYJ4 488 aa25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 RTEL1Q9NZ71 1219 aa25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 V9GY48 417 aaPredicted RBP25.76■■□□□ 1.71
PPFIA3-211ENST00000602848 GRIN3BO60391 1043 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 MMP1P03956 469 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 GUCY1A2P33402 732 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 CACNB3P54284 484 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 TCP10Q12799 353 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 SPDYE2Q495Y8 402 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 CCDC82Q8N4S0 544 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 FOXP1Q9H334 677 aaPredicted RBP25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 ZNF70Q9UC06 446 aaPredicted RBP25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 MYH8P13535 1937 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 CNTNAP5Q8WYK1 1306 aa25.75■■□□□ 1.71
PPFIA3-211ENST00000602848 PALM3A6NDB9 673 aaPredicted RBP25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 DDTLA6NHG4 134 aaPredicted RBP25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 SBF1O95248 1867 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 AKR1B1P15121 316 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 GNL2Q13823 731 aaKnown RBP25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 PKN1Q16512 942 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 MYSM1Q5VVJ2 828 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 TATDN1Q6P1N9 297 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 SH3BP5LQ7L8J4 393 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 CMTR1Q8N1G2 835 aaKnown RBP25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 FAM151AQ8WW52 585 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 ZBED3Q96IU2 234 aaPredicted RBP25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 ZBTB12Q9Y330 459 aaPredicted RBP25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 MYO1BO43795 1136 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 TTLL1O95922 423 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 GJB4Q9NTQ9 266 aa25.74■■□□□ 1.71
PPFIA3-211ENST00000602848 POLR3EQ9NVU0 708 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms