RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 FAM163AQ96GL9 167 aaPredicted RBP17.96■□□□□ 0.47
TRIM11-205ENST00000602308 BICC1Q9H694 974 aaKnown RBP17.96■□□□□ 0.47
TRIM11-205ENST00000602308 YBX2Q9Y2T7 364 aaKnown RBP17.96■□□□□ 0.47
TRIM11-205ENST00000602308 WDFY4Q6ZS81 3184 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 NBPF7P0C2Y1 421 aaPredicted RBP17.95■□□□□ 0.46
TRIM11-205ENST00000602308 SLC5A1P13866 664 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 CCNA1P78396 465 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 RAB30Q15771 203 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 RABL6Q3YEC7 729 aaPredicted RBP17.95■□□□□ 0.46
TRIM11-205ENST00000602308 PRAMEF19Q5SWL8 479 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 ANKRD44Q8N8A2 993 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 LPIN2Q92539 896 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 EMILIN3Q9NT22 766 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 MSRAQ9UJ68 235 aa17.95■□□□□ 0.46
TRIM11-205ENST00000602308 PRR33A8MZF0 331 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 USP17L10C9JJH3 530 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 NPM3O75607 178 aaKnown RBP17.94■□□□□ 0.46
TRIM11-205ENST00000602308 TIMP1P01033 207 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 SHROOM1Q2M3G4 852 aaPredicted RBP17.94■□□□□ 0.46
TRIM11-205ENST00000602308 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 HERVK_113Q902F9 699 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 SLC28A3Q9HAS3 691 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 CD320Q9NPF0 282 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 IVNS1ABPQ9Y6Y0 642 aa17.94■□□□□ 0.46
TRIM11-205ENST00000602308 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
TRIM11-205ENST00000602308 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
TRIM11-205ENST00000602308 ANKRD33Q7Z3H0 272 aa17.93■□□□□ 0.46
TRIM11-205ENST00000602308 A0A1W2PQ45 241 aaPredicted RBP17.92■□□□□ 0.46
TRIM11-205ENST00000602308 A0A1W2PQY0 241 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 ALDH1L1O75891 902 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 ASNSP08243 561 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 ACRP10323 421 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 ZNF365Q70YC5 407 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 DPP9Q86TI2 863 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 DZIP1Q86YF9 867 aaKnown RBP17.92■□□□□ 0.46
TRIM11-205ENST00000602308 TOX2Q96NM4 488 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 BTBD7Q9P203 1132 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 TBX21Q9UL17 535 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 DENND2AQ9ULE3 1009 aa17.92■□□□□ 0.46
TRIM11-205ENST00000602308 PRRC2BQ5JSZ5 2229 aaKnown RBP17.91■□□□□ 0.46
TRIM11-205ENST00000602308 GPR75-ASB3A0A0A6YYF3 556 aa17.91■□□□□ 0.46
TRIM11-205ENST00000602308 PPIGQ13427 754 aaKnown RBP eCLIP17.91■□□□□ 0.464e-6■■□□□ 14
TRIM11-205ENST00000602308 HERC5Q9UII4 1024 aaKnown RBP17.91■□□□□ 0.46
TRIM11-205ENST00000602308 MROH7-TTC4A0A0A0MT08 1334 aa17.91■□□□□ 0.46
TRIM11-205ENST00000602308 LRRC37A2A6NM11 1700 aa17.9■□□□□ 0.46
TRIM11-205ENST00000602308 DCDC2CA8MYV0 355 aa17.9■□□□□ 0.46
TRIM11-205ENST00000602308 CSF2RAP15509 400 aa17.9■□□□□ 0.46
TRIM11-205ENST00000602308 PHKA1P46020 1223 aa17.9■□□□□ 0.46
TRIM11-205ENST00000602308 FBXL18Q96ME1 805 aa17.9■□□□□ 0.46
TRIM11-205ENST00000602308 GNL3LQ9NVN8 582 aaKnown RBP17.9■□□□□ 0.46
TRIM11-205ENST00000602308 COBLO75128 1261 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 VAMP4O75379 141 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 PGK1P00558 417 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 ADORA2AP29274 412 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 CCDC174Q6PII3 467 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 SLF2Q8IX21 1173 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 ZGPATQ8N5A5 531 aaKnown RBP17.89■□□□□ 0.45
TRIM11-205ENST00000602308 ZNF384Q8TF68 577 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 SRCIN1Q9C0H9 1055 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 XPNPEP3Q9NQH7 507 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 ABCF2Q9UG63 623 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 COG5Q9UP83 839 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 MTCH2Q9Y6C9 303 aa17.89■□□□□ 0.45
TRIM11-205ENST00000602308 TRANK1O15050 2925 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 EYA2O00167 538 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 RFXAPO00287 272 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 SEMA3EO15041 775 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 PSRC1Q6PGN9 363 aaPredicted RBP17.88■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L2Q6R6M4 530 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 SLC4A10Q6U841 1118 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 DNAJC18Q9H819 358 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 CACNA1FO60840 1977 aa17.88■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L15C9J2P7 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L13C9JLJ4 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L11C9JVI0 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L18D6R9N7 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L22D6RA61 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L17D6RBQ6 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L19D6RCP7 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L20D6RJB6 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 GDF11O95390 407 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 POU3F3P20264 500 aaPredicted RBP17.87■□□□□ 0.45
TRIM11-205ENST00000602308 RABGGTBP53611 331 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 USP17L24Q0WX57 530 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 LBX2Q6XYB7 198 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 CATSPERGQ6ZRH7 1159 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 RNF180Q86T96 592 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 UIMC1Q96RL1 719 aa17.87■□□□□ 0.45
TRIM11-205ENST00000602308 SMCHD1A6NHR9 2005 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 MYOGP15173 224 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 MECOMQ03112 1051 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 PPP2R2DQ66LE6 453 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 KRT40Q6A162 431 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 ATG9AQ7Z3C6 839 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 C12orf42Q96LP6 360 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 PI4KBQ9UBF8 816 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 ZBTB21Q9ULJ3 1066 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 GBF1Q92538 1859 aa17.86■□□□□ 0.45
TRIM11-205ENST00000602308 USP34Q70CQ2 3546 aa17.85■□□□□ 0.45
TRIM11-205ENST00000602308 RARBP10826 455 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms