RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 USP17L18D6R9N7 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L22D6RA61 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L17D6RBQ6 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L19D6RCP7 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L20D6RJB6 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 MSCO60682 206 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 MDM2Q00987 491 aaPredicted RBP22.43■■□□□ 1.18
IRF3-231ENST00000602190 USP17L24Q0WX57 530 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 SSH3Q8TE77 659 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 LPAR1Q92633 364 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 EDC3Q96F86 508 aaKnown RBP22.43■■□□□ 1.18
IRF3-231ENST00000602190 PAGR1Q9BTK6 254 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 PIH1D3Q9NQM4 214 aaKnown RBP22.43■■□□□ 1.18
IRF3-231ENST00000602190 SNRKQ9NRH2 765 aa22.43■■□□□ 1.18
IRF3-231ENST00000602190 GH2P01242 217 aa22.42■■□□□ 1.18
IRF3-231ENST00000602190 HLA-DOAP06340 250 aa22.42■■□□□ 1.18
IRF3-231ENST00000602190 DDX20Q9UHI6 824 aaKnown RBP22.42■■□□□ 1.18
IRF3-231ENST00000602190 TNNQ9UQP3 1299 aa22.42■■□□□ 1.18
IRF3-231ENST00000602190 VCANP13611 3396 aa22.42■■□□□ 1.18
IRF3-231ENST00000602190 PARP14Q460N5 1801 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 DNM1LO00429 736 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 VCAM1P19320 739 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 ZAP70P43403 619 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 DYNLL1P63167 89 aaKnown RBP22.41■■□□□ 1.18
IRF3-231ENST00000602190 CCNA1P78396 465 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 ATF7IPQ6VMQ6 1270 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 CERS3Q8IU89 383 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 BTBD7Q9P203 1132 aa22.41■■□□□ 1.18
IRF3-231ENST00000602190 GLRX3O76003 335 aaKnown RBP22.4■■□□□ 1.18
IRF3-231ENST00000602190 CYBAP13498 195 aa22.4■■□□□ 1.18
IRF3-231ENST00000602190 CCDC158Q5M9N0 1113 aa22.4■■□□□ 1.18
IRF3-231ENST00000602190 TTC39AQ5SRH9 613 aa22.4■■□□□ 1.18
IRF3-231ENST00000602190 MFSD14CQ5VZR4 134 aa22.4■■□□□ 1.18
IRF3-231ENST00000602190 TMED8Q6PL24 325 aaPredicted RBP22.4■■□□□ 1.18
IRF3-231ENST00000602190 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.4■■□□□ 1.188e-8■■■□□ 16.6
IRF3-231ENST00000602190 TRPV1Q8NER1 839 aa22.4■■□□□ 1.18
IRF3-231ENST00000602190 NPLOC4Q8TAT6 608 aa22.4■■□□□ 1.18
IRF3-231ENST00000602190 NOP58Q9Y2X3 529 aaKnown RBP22.4■■□□□ 1.18
IRF3-231ENST00000602190 SPTBN5Q9NRC6 3674 aaKnown RBP22.4■■□□□ 1.18
IRF3-231ENST00000602190 SPDYE16A6NNV3 312 aaPredicted RBP22.39■■□□□ 1.17
IRF3-231ENST00000602190 GUCY1A2P33402 732 aa22.39■■□□□ 1.17
IRF3-231ENST00000602190 USP14P54578 494 aa22.39■■□□□ 1.17
IRF3-231ENST00000602190 SNX17Q15036 470 aa22.39■■□□□ 1.17
IRF3-231ENST00000602190 SAP30BPQ9UHR5 308 aaKnown RBP22.39■■□□□ 1.17
IRF3-231ENST00000602190 SERPINB13Q9UIV8 391 aa22.39■■□□□ 1.17
IRF3-231ENST00000602190 DBNLQ9UJU6 430 aaKnown RBP22.39■■□□□ 1.17
IRF3-231ENST00000602190 CCAR1Q8IX12 1150 aaKnown RBP22.38■■□□□ 1.17
IRF3-231ENST00000602190 TRIM34Q9BYJ4 488 aa22.38■■□□□ 1.17
IRF3-231ENST00000602190 SENP6Q9GZR1 1112 aaPredicted RBP22.38■■□□□ 1.17
IRF3-231ENST00000602190 NAV1Q8NEY1 1877 aa22.38■■□□□ 1.17
IRF3-231ENST00000602190 IPO8O15397 1037 aaKnown RBP22.37■■□□□ 1.17
IRF3-231ENST00000602190 GABPAQ06546 454 aa22.37■■□□□ 1.17
IRF3-231ENST00000602190 OLFML2BQ68BL8 750 aa22.37■■□□□ 1.17
IRF3-231ENST00000602190 ACER1Q8TDN7 264 aa22.37■■□□□ 1.17
IRF3-231ENST00000602190 CDH23Q9H251 3354 aa22.37■■□□□ 1.17
IRF3-231ENST00000602190 PRUNE2Q8WUY3 3088 aa22.37■■□□□ 1.17
IRF3-231ENST00000602190 CYP7A1P22680 504 aa22.36■■□□□ 1.17
IRF3-231ENST00000602190 SHMT1P34896 483 aa22.36■■□□□ 1.17
IRF3-231ENST00000602190 RTP1P59025 263 aa22.35■■□□□ 1.17
IRF3-231ENST00000602190 ATP8B2P98198 1209 aa22.35■■□□□ 1.17
IRF3-231ENST00000602190 TLR7Q9NYK1 1049 aaKnown RBP22.35■■□□□ 1.17
IRF3-231ENST00000602190 CYP2C19P33261 490 aa22.34■■□□□ 1.17
IRF3-231ENST00000602190 C1orf53Q5VUE5 145 aa22.34■■□□□ 1.17
IRF3-231ENST00000602190 SHCBP1Q8NEM2 672 aa22.34■■□□□ 1.17
IRF3-231ENST00000602190 FEZ1Q99689 392 aa22.34■■□□□ 1.17
IRF3-231ENST00000602190 LBHD1Q9BQE6 289 aaPredicted RBP22.34■■□□□ 1.17
IRF3-231ENST00000602190 RIOK1Q9BRS2 568 aaKnown RBP22.34■■□□□ 1.17
IRF3-231ENST00000602190 NDUFB9Q9Y6M9 179 aa22.34■■□□□ 1.17
IRF3-231ENST00000602190 STRNO43815 780 aa22.33■■□□□ 1.17
IRF3-231ENST00000602190 ATP2B2Q01814 1243 aa22.33■■□□□ 1.17
IRF3-231ENST00000602190 ZYXQ15942 572 aaKnown RBP22.33■■□□□ 1.17
IRF3-231ENST00000602190 ABCB5Q2M3G0 1257 aa22.33■■□□□ 1.17
IRF3-231ENST00000602190 CERKLQ49MI3 558 aaPredicted RBP22.33■■□□□ 1.17
IRF3-231ENST00000602190 TTC6Q86TZ1 520 aa22.33■■□□□ 1.17
IRF3-231ENST00000602190 EAF2Q96CJ1 260 aaPredicted RBP22.33■■□□□ 1.17
IRF3-231ENST00000602190 IVNS1ABPQ9Y6Y0 642 aa22.33■■□□□ 1.17
IRF3-231ENST00000602190 ZNFX1Q9P2E3 1918 aaKnown RBP22.33■■□□□ 1.16
IRF3-231ENST00000602190 BCAR3O75815 825 aa22.32■■□□□ 1.16
IRF3-231ENST00000602190 PLCD1P51178 756 aa22.32■■□□□ 1.16
IRF3-231ENST00000602190 SLC39A5Q6ZMH5 540 aa22.32■■□□□ 1.16
IRF3-231ENST00000602190 TMEM57Q8N5G2 664 aa22.32■■□□□ 1.16
IRF3-231ENST00000602190 MIGA1Q8NAN2 632 aa22.32■■□□□ 1.16
IRF3-231ENST00000602190 MOV10L1Q9BXT6 1211 aaKnown RBP22.32■■□□□ 1.16
IRF3-231ENST00000602190 RPAP3Q9H6T3 665 aaPredicted RBP22.32■■□□□ 1.16
IRF3-231ENST00000602190 TTC28Q96AY4 2481 aa22.31■■□□□ 1.16
IRF3-231ENST00000602190 A0A1W2PRG0 241 aa22.31■■□□□ 1.16
IRF3-231ENST00000602190 SEPT4O43236 478 aa22.31■■□□□ 1.16
IRF3-231ENST00000602190 ATN1P54259 1190 aaPredicted RBP22.31■■□□□ 1.16
IRF3-231ENST00000602190 RAB3GAP1Q15042 981 aa22.31■■□□□ 1.16
IRF3-231ENST00000602190 ZNF697Q5TEC3 545 aa22.31■■□□□ 1.16
IRF3-231ENST00000602190 SMCHD1A6NHR9 2005 aa22.31■■□□□ 1.16
IRF3-231ENST00000602190 ROBO3Q96MS0 1386 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 ADORA2AP29274 412 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 USP5P45974 858 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 SHHQ15465 462 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 C9orf50Q5SZB4 431 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 ABRAQ8N0Z2 381 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 MAGEB6Q8N7X4 407 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 ARRDC4Q8NCT1 418 aa22.3■■□□□ 1.16
IRF3-231ENST00000602190 ANTXR1Q9H6X2 564 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms